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Published on: July 3, 2020
Rank-based estimate of four-parameter logistic model
Kimberly S Crimin1, Joseph W McKean, Thomas J Vidmar
1Biostatistics, Vanderbilt University, Nashville, TN, USA. kimberly.crimin@novartis.com.
A new robust estimation method using the Wilcoxon norm improves accuracy in calculating the half maximal inhibitory concentration (IC50) during drug development, especially when data contains outliers. This rank-based approach is comparable to traditional methods when data is clean.
Area of Science:
- Pharmacology
- Biostatistics
- Computational Chemistry
Background:
- Calculating the half maximal inhibitory concentration (IC50) is crucial in drug development, often using a four-parameter logistic model.
- High-throughput screening generates large datasets where outliers can compromise traditional IC50 estimations.
Purpose of the Study:
- To introduce a robust, rank-based estimation procedure for the four-parameter logistic model to accurately determine IC50 values.
- To address the challenge of data outliers in high-throughput drug screening analysis.
Main Methods:
- A novel rank-based estimation method analogous to least squares, utilizing the Wilcoxon norm, was developed.
- The proposed robust procedure was applied to pharmaceutical industry data and validated through a simulation study.
Main Results:
- The robust IC50 estimation method demonstrated comparable accuracy to least squares estimates in the absence of outliers.
- The rank-based method provided more accurate IC50 values when outliers were present in the response data.
- A robust goodness-of-fit test was also developed and proposed.
Conclusions:
- The proposed rank-based estimation method offers a more accurate and reliable approach for IC50 calculation in drug development, particularly in the presence of outliers.
- This robust statistical technique enhances the quality of data analysis in high-throughput screening, leading to more dependable drug efficacy assessments.
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