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Updated: May 24, 2026

High-throughput Screening of Chemical Compounds to Elucidate Their Effects on Bacterial Persistence
Published on: February 23, 2021
Signaling-mediated bacterial persister formation
Nicole M Vega1, Kyle R Allison, Ahmad S Khalil
1Howard Hughes Medical Institute, Boston University, Boston, Massachusetts, USA.
Abstract:
Here we show that bacterial communication through indole signaling induces persistence, a phenomenon in which a subset of an isogenic bacterial population tolerates antibiotic treatment. We monitor indole-induced persister formation using microfluidics and identify the role of oxidative-stress and phage-shock pathways in this phenomenon. We propose a model in which indole signaling 'inoculates' a bacterial subpopulation against antibiotics by activating stress responses, leading to persister formation.
Insights
Bacterial indole signaling triggers antibiotic tolerance in a subpopulation, a phenomenon known as bacterial persistence. This occurs via activation of stress response pathways, leading to increased survival rates against antibiotics.
Area of Science:
- Microbiology
- Bacterial communication
- Antibiotic resistance
Background:
- Bacterial persistence is a critical factor in antibiotic treatment failure.
- Understanding the mechanisms of bacterial persistence is crucial for developing new therapeutic strategies.
Purpose of the Study:
- To investigate the role of indole signaling in inducing bacterial persistence.
- To identify the specific pathways involved in indole-mediated persister formation.
Main Methods:
- Utilized microfluidics to monitor indole-induced persister formation in real-time.
- Investigated the involvement of oxidative-stress and phage-shock pathways.
Main Results:
- Demonstrated that indole signaling directly induces bacterial persistence.
- Identified oxidative-stress and phage-shock pathways as key mediators of this phenomenon.
- Proposed a model where indole signaling primes bacteria for antibiotic survival.
Conclusions:
- Indole signaling is a significant driver of bacterial persistence.
- Targeting indole signaling or associated stress response pathways could be a novel approach to combat antibiotic resistance.
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