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Updated: May 23, 2026

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Isolation and Functional Analysis of Mitochondria from Cultured Cells and Mouse Tissue
Published on: March 23, 2015
Application of a homogenous membrane potential assay to assess mitochondrial function
Srilatha Sakamuru1, Xiao Li, Matias S Attene-Ramos
1NIH Chemical Genomics Center, National Institutes of Health, Bethesda, Maryland 20892-3370, USA.
Physiological Genomics
|March 22, 2012
Summary
This study identifies Mito-MPS as the optimal dye for measuring mitochondrial membrane potential (MMP) in high-throughput screening. A new assay using Mito-MPS successfully screened compounds, revealing 14 that disrupt MMP.
Area of Science:
- Biochemistry
- Cell Biology
- Toxicology
Background:
- Mitochondrial membrane potential (MMP) is crucial for cellular energy production and function.
- Decreased MMP is an indicator of mitochondrial dysfunction and potential cell death.
- Accurate measurement of MMP is vital for assessing chemical toxicity and drug effects.
Purpose of the Study:
- To identify an optimal fluorescent dye for quantifying MMP decreases in a high-throughput screening (HTS) format.
- To develop and validate a homogenous cell-based assay using the optimal dye for HTS.
- To screen a library of pharmacologically active compounds for their ability to disrupt MMP.
Main Methods:
- Comparison of four fluorescent dyes (Mito-MPS, JC-1, Rhodamine 123, TM-Rhodamine) for MMP measurement in HepG2 cells.
- Optimization of a homogenous cell-based assay in a 1,536-well plate format.
- Quantitative HTS of 1,280 compounds using the developed Mito-MPS assay.
Main Results:
- Mito-MPS demonstrated superior performance for quantifying MMP decreases in HepG2 cells under HTS conditions.
- The optimized homogenous cell-based Mito-MPS assay was successfully implemented.
- Fourteen compounds were identified that disrupt MMP, with potencies ranging from 0.15 to 18 μM.
- Structure-activity relationships were observed for tyrphostin and 3'-substituted indolone analogs.
Conclusions:
- Mito-MPS is the optimal dye for HTS-based MMP assessment.
- The developed homogenous cell-based Mito-MPS assay is effective for large-scale chemical screening.
- This assay facilitates the identification of compounds that impair mitochondrial function.
