DNA structure, nucleosome placement and chromatin remodelling: a perspective
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Updated: May 23, 2026

Probing The Structure And Dynamics Of Nucleosomes Using Atomic Force Microscopy Imaging
Published on: January 31, 2019
Andrew A Travers1, Cédric Vaillant, Alain Arneodo
1MRC Laboratory of Molecular Biology, Hills Road, Cambridge CB2 0QH, U.K. aat@mrc-lmb.cam.ac.uk
Abstract:
A major question in chromatin biology is to what extent the sequence of DNA directly determines the genetic and chromatin organization of a eukaryotic genome? We consider two aspects to this question: the DNA sequence-specified positioning of nucleosomes and the determination of NDRs (nucleosome-depleted regions) or barriers. We argue that, in budding yeast, while DNA sequence-specified nucleosome positioning may contribute to positions flanking the regions lacking nucleosomes, DNA thermodynamic stability is a major component determinant of the genetic organization of this organism.
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