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Updated: May 23, 2026

Robust Detection of Gene Amplification in Formalin-Fixed Paraffin-Embedded Samples by Fluorescence In Situ Hybridization
Published on: July 12, 2024
Fibroblast growth factor receptor 2 gene amplification status and its clinicopathologic significance in gastric
Eun-Jung Jung1, Eun-Ji Jung, Sun Young Min
1Department of Pathology, Seoul National University College of Medicine, Seoul 110-799, Republic of Korea.
Abstract:
Fibroblast growth factor receptor 2 is a member of receptor tyrosine kinase family, and fibroblast growth factor receptor 2 gene amplification or missense mutation has been observed in various human cancers, including gastric carcinoma. Recent studies have shown that anti-fibroblast growth factor receptor 2 agents inhibit tumor progression in various human cancers, such as endometrial carcinoma and gastric carcinoma, which remains one of the most frequent causes of cancer-related death worldwide. We considered that knowledge of the status of fibroblast growth factor receptor 2 gene amplification in gastric carcinoma might aid in targeted cancer therapy. In this study, fibroblast growth factor receptor 2 amplification status was evaluated by fluorescence in situ hybridization in 313 surgically resected gastric carcinoma tissues, and the results were validated by quantitative real-time polymerase chain reaction. In addition, potential associations between clinicopathologic parameters and the presence of fibroblast growth factor receptor 2 amplification were investigated, and survival analysis was performed. Of the 313 cases, 14 (4.5%) showed fibroblast growth factor receptor 2 amplification by fluorescence in situ hybridization. Fibroblast growth factor receptor 2 amplification was found to be associated with a higher pT stage (P = .023), higher pN stage (P = .038), and distant metastasis (P = .009) and to be significantly associated with lower cancer-specific survival by univariate analysis (P = .012). Gastric carcinoma with fibroblast growth factor receptor 2 amplification was found to be associated with advanced disease and a poor prognosis. We believe that the determination of fibroblast growth factor receptor 2 amplification status could allow the identification of a subset of cancers sensitive to targeted fibroblast growth factor receptor 2 inhibitor-based therapy.
Insights
Fibroblast growth factor receptor 2 (FGFR2) amplification occurs in 4.5% of gastric cancers. This amplification is linked to advanced disease and poorer survival, suggesting FGFR2 inhibitors may benefit specific patient subsets.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Fibroblast growth factor receptor 2 (FGFR2) is a receptor tyrosine kinase implicated in various cancers.
- FGFR2 gene amplification or mutation is observed in gastric carcinoma, a leading cause of cancer death.
- Targeted therapies against FGFR2 show promise in inhibiting tumor progression.
Purpose of the Study:
- To evaluate the frequency of FGFR2 gene amplification in gastric carcinoma.
- To investigate the association between FGFR2 amplification and clinicopathologic parameters.
- To determine the prognostic significance of FGFR2 amplification in gastric cancer patients.
Main Methods:
- Fluorescence in situ hybridization (FISH) was used to assess FGFR2 amplification in 313 gastric carcinoma tissues.
- Quantitative real-time polymerase chain reaction (qPCR) validated FISH results.
- Clinicopathologic parameters and survival data were analyzed in relation to FGFR2 amplification status.
Main Results:
- FGFR2 amplification was detected in 14 (4.5%) of 313 gastric carcinoma cases.
- FGFR2 amplification correlated significantly with higher pT stage, higher pN stage, and distant metastasis.
- Univariate analysis revealed a significant association between FGFR2 amplification and poorer cancer-specific survival.
Conclusions:
- FGFR2 amplification in gastric carcinoma is associated with advanced disease and unfavorable prognosis.
- Identifying FGFR2 amplification status may help select patients for targeted FGFR2 inhibitor therapy.
- This finding supports the potential of FGFR2-targeted agents for a subset of gastric cancer patients.
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