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Updated: May 23, 2026

Establishing Stable Binary Cultures of Symbiotic Saccharibacteria from the Oral Cavity
Published on: April 13, 2021
Streptococcus troglodytae sp. nov., from the chimpanzee oral cavity
Masaaki Okamoto1, Susumu Imai2, Mayu Miyanohara2
1Department of Oral Microbiology, Tsurumi University School of Dental Medicine, 2-1-3, Tsurumi, Tsurumi-ku, Yokohama 230-8501, Japan.
Abstract:
Six strains, TKU 25, TKU 28, TKU 30, TKU 31(T), TKU 33 and TKU 34, were isolated from the oral cavity of a chimpanzee (Pan troglodytes). Colonies of strains grown on Mitis-Salivarius agar were similar in morphology to that of Streptococcus mutans. The novel strains were Gram-stain-positive, facultatively anaerobic cocci that lacked catalase activity. Analysis of the partial 16S rRNA gene sequences of these isolates showed that the most closely related strain was the type strain of S. mutans (96.4 %). The next closely related strains to the isolates were the type strains of Streptococcus devriesei (94.5 %) and Streptococcus downei (93.9 %). These isolates could be distinguished from S. mutans by inulin fermentation and alkaline phosphatase activity (API ZYM system). The peptidoglycan type of the novel isolates was Glu-Lys-Ala(3). Strains were not susceptible to bacitracin. On the basis of phenotypic characterization, partial 16S rRNA gene and two housekeeping gene (groEL and sodA) sequence data, we propose a novel taxon, Streptococcus troglodytae sp. nov.; the type strain is TKU 31(T) ( = JCM 18038(T) = DSM 25324(T)).
Insights
Six novel bacterial strains were discovered in a chimpanzee's mouth, exhibiting characteristics similar to Streptococcus mutans. These findings introduce a new species, Streptococcus troglodytae, expanding our understanding of oral microbiome diversity.
Area of Science:
- Microbiology
- Primate Oral Microbiome
- Bacterial Taxonomy
Background:
- The oral cavity harbors diverse bacterial communities.
- Streptococcus mutans is a well-known oral bacterium associated with dental caries.
- Limited research exists on the oral microbiota of non-human primates like chimpanzees.
Purpose of the Study:
- To isolate and characterize novel bacterial strains from the oral cavity of a chimpanzee.
- To determine the taxonomic classification of these novel isolates.
- To compare their phenotypic and genotypic characteristics with known oral streptococci.
Main Methods:
- Isolation of bacterial strains from chimpanzee oral swabs.
- Gram staining, catalase activity, and colonial morphology assessment.
- Partial 16S rRNA gene sequencing and phylogenetic analysis.
- Phenotypic characterization using the API ZYM system.
- Peptidoglycan typing and antibiotic susceptibility testing.
Main Results:
- Six strains (TKU 25, 28, 30, 31(T), 33, 34) were isolated and showed similarity to Streptococcus mutans.
- Phylogenetic analysis based on 16S rRNA gene sequences indicated the closest relationship to S. mutans (96.4%).
- Distinct phenotypic features, including inulin fermentation and alkaline phosphatase activity, differentiated these strains from S. mutans.
- Sequence data from housekeeping genes (groEL and sodA) supported the establishment of a new species.
Conclusions:
- A novel bacterial species, Streptococcus troglodytae sp. nov., is proposed based on phenotypic and genotypic data.
- The type strain TKU 31(T) represents a distinct lineage within the Streptococcus genus.
- This discovery contributes to the understanding of primate-associated oral bacteria and their evolutionary relationships.
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