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Related Concept Videos

Experimental RNAi02:15

Experimental RNAi

RNA interference (RNAi) is a cellular mechanism that inhibits gene expression by suppressing its transcription or activating the RNA degradation process. The mechanism was discovered by Andrew Fire and Craig Mello in 1998 in plants. Today, it is observed in almost all eukaryotes, including protozoa, flies, nematodes, insects, parasites, and mammals. This precise cellular mechanism of gene silencing has been developed into a technique that provides an efficient way to identify and determine the...
siRNA - Small Interfering RNAs02:30

siRNA - Small Interfering RNAs

Small interfering RNAs, or siRNAs, are short regulatory RNA molecules that can silence genes post-transcriptionally, as well as the transcriptional level in some cases. siRNAs are important for protecting cells against viral infections and silencing transposable genetic elements.
In the cytoplasm, siRNA is processed from a double-stranded RNA, which comes from either endogenous DNA transcription or exogenous sources like a virus. This double-stranded RNA is then cleaved by the ATP-dependent...
RNA Interference01:23

RNA Interference

RNA interference (RNAi) is a process in which a small non-coding RNA molecule blocks the post-transcriptional expression of a gene by binding to its messenger RNA (mRNA) and preventing the protein from being translated.
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
In-vitro Mutagenesis01:16

In-vitro Mutagenesis

To learn more about the function of a gene, researchers can observe what happens when the gene is inactivated or “knocked out,” by creating genetically engineered knockout animals. Knockout mice have been particularly useful as models for human diseases such as cancer, Parkinson’s disease, and diabetes.

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Related Experiment Video

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Electroporation-Based CRISPR-Cas9-Mediated Gene Knockout in THP-1 Cells and Single-Cell Clone Isolation
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Antisense-mediated exon-skipping to induce gene knockdown.

Petra Disterer1, Bernard Khoo

  • 1Department of Endocrinology, UCL Medical School, London, UK.

Methods in Molecular Biology (Clifton, N.J.)
|March 29, 2012
PubMed
Summary

Antisense oligonucleotides (ASOs) offer a novel therapeutic strategy for gene silencing by inducing exon-skipping. This chapter details ASO applications and provides protocols for in vitro gene knockdown and quantification.

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Evaluation of Exon Inclusion Induced by Splice Switching Antisense Oligonucleotides in SMA Patient Fibroblasts
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Evaluation of Exon Inclusion Induced by Splice Switching Antisense Oligonucleotides in SMA Patient Fibroblasts

Published on: May 11, 2018

Area of Science:

  • Molecular Biology
  • Genetics
  • Biotechnology

Background:

  • Antisense oligonucleotides (ASOs) are short nucleic acid sequences designed to modulate gene expression.
  • Exon-skipping is a technique utilizing ASOs to exclude specific exons during RNA splicing, altering protein production.
  • This approach holds promise for targeting disease-causing genes or specific isoforms.

Purpose of the Study:

  • To explore the therapeutic potential of exon-skipping antisense oligonucleotides (ASOs).
  • To provide a practical guide for implementing exon-skipping technology.
  • To demonstrate the induction and quantification of ASO-mediated exon-skipping.

Main Methods:

  • Utilizing exon-skipping antisense oligonucleotides (ASOs) to target specific gene sequences.
  • Developing an in vitro protocol for inducing exon-skipping in Apolipoprotein B (ApoB).
  • Employing real-time PCR for accurate quantification of exon-skipping events.

Main Results:

  • Successful induction of exon-skipping in Apolipoprotein B (ApoB) was achieved in vitro.
  • Real-time PCR provided a reliable method for quantifying the extent of exon-skipping.
  • The study establishes a framework for applying ASO technology therapeutically.

Conclusions:

  • Exon-skipping ASOs represent a viable strategy for gene expression modulation.
  • The provided protocols facilitate the practical application and validation of this technique.
  • This method has significant implications for developing targeted gene therapies.