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Utilizing Functional Genomics Screening to Identify Potentially Novel Drug Targets in Cancer Cell Spheroid Cultures
Published on: December 26, 2016
SCD1 inhibition causes cancer cell death by depleting mono-unsaturated fatty acids
Paul Mason1, Beirong Liang, Lingyun Li
1Genzyme Corporation, Waltham, Massachusetts, United States of America. paul.mason@genzyme.com
Abstract:
Increased metabolism is a requirement for tumor cell proliferation. To understand the dependence of tumor cells on fatty acid metabolism, we evaluated various nodes of the fatty acid synthesis pathway. Using RNAi we have demonstrated that depletion of fatty-acid synthesis pathway enzymes SCD1, FASN, or ACC1 in HCT116 colon cancer cells results in cytotoxicity that is reversible by addition of exogenous fatty acids. This conditional phenotype is most pronounced when SCD1 is depleted. We used this fatty-acid rescue strategy to characterize several small-molecule inhibitors of fatty acid synthesis, including identification of TOFA as a potent SCD1 inhibitor, representing a previously undescribed activity for this compound. Reference FASN and ACC inhibitors show cytotoxicity that is less pronounced than that of TOFA, and fatty-acid rescue profiles consistent with their proposed enzyme targets. Two reference SCD1 inhibitors show low-nanomolar cytotoxicity that is offset by at least two orders of magnitude by exogenous oleate. One of these inhibitors slows growth of HCT116 xenograft tumors. Our data outline an effective strategy for interrogation of on-mechanism potency and pathway-node-specificity of fatty acid synthesis inhibitors, establish an unambiguous link between fatty acid synthesis and cancer cell survival, and point toward SCD1 as a key target in this pathway.
Insights
Cancer cells depend on fatty acid synthesis for survival. Inhibiting stearoyl-CoA desaturase 1 (SCD1) shows potent anti-cancer effects, highlighting SCD1 as a key therapeutic target.
Area of Science:
- Biochemistry
- Cancer Biology
- Metabolic Pathways
Background:
- Tumor cell proliferation necessitates increased metabolism.
- Fatty acid metabolism is crucial for cancer cell survival and growth.
- Understanding the dependence of tumor cells on fatty acid synthesis is vital for developing targeted therapies.
Purpose of the Study:
- To investigate the role of fatty acid synthesis pathway enzymes in colon cancer cell proliferation.
- To identify and characterize small-molecule inhibitors targeting fatty acid synthesis.
- To establish fatty acid synthesis as a viable therapeutic target in cancer.
Main Methods:
- RNA interference (RNAi) was used to deplete key fatty acid synthesis enzymes (SCD1, FASN, ACC1) in HCT116 colon cancer cells.
- A fatty acid rescue strategy was employed to assess the conditional cytotoxicity of enzyme depletion and drug treatment.
- Small-molecule inhibitors of fatty acid synthesis were characterized, including TOFA as an SCD1 inhibitor.
Main Results:
- Depletion of SCD1, FASN, or ACC1 resulted in reversible cytotoxicity in HCT116 cells, with SCD1 depletion showing the most pronounced effect.
- TOFA was identified as a potent SCD1 inhibitor.
- Reference FASN and ACC inhibitors exhibited less pronounced cytotoxicity compared to TOFA.
- Two SCD1 inhibitors demonstrated low-nanomolar cytotoxicity, significantly reduced by exogenous oleate, and one slowed tumor growth in xenografts.
Conclusions:
- Fatty acid synthesis is essential for colon cancer cell survival.
- SCD1 is a critical target in the fatty acid synthesis pathway for cancer therapy.
- The study provides a robust strategy for evaluating the specificity and potency of fatty acid synthesis inhibitors.
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