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Published on: October 14, 2025
Complete genome of temperate phage ENT39118 from Cronobacter sakazakii
Young-Duck Lee1, Jong-Hyun Park
1Department of Food Science and Biotechnology, College of Engineering, Gachon University, Sungnam-Si, Kyunggi-Do, South Korea.
Insights
This study sequenced the genome of phage ENT39118, isolated from Cronobacter sakazakii found in infant formula. This research provides new insights into potential virulence factors in this dangerous bacterium.
Area of Science:
- Microbiology
- Virology
- Genomics
Background:
- Cronobacter sakazakii infections pose a significant risk to infants.
- Prophages are known to carry virulence factors in C. sakazakii.
- Identifying phage-host interactions is crucial for understanding bacterial pathogenicity.
Purpose of the Study:
- To perform genomic sequencing and annotation of the temperate phage ENT39118.
- To investigate the potential role of phage ENT39118 in C. sakazakii virulence.
- To characterize a phage isolated from a C. sakazakii strain found in powdered infant formula.
Main Methods:
- Isolation of phage ENT39118 from wild-type Cronobacter sakazakii.
- Determination of the complete genomic sequence of phage ENT39118 (dsDNA, 39,012 bp).
- Bioinformatic analysis and annotation of the phage genome.
Main Results:
- Phage ENT39118 belongs to the Siphoviridae family.
- The genome sequence of ENT39118 exhibits weak similarity to prophage regions in C. sakazakii BAA-894.
- This is the first genomic characterization of this specific temperate phage.
Conclusions:
- The genomic data of phage ENT39118 provides a foundation for future studies on its role in C. sakazakii virulence.
- Understanding temperate phages from foodborne pathogens like C. sakazakii is essential for food safety.
- This study contributes novel genomic information on a phage associated with a bacterium relevant to infant health.
Abstract:
Cronobacter sakazakii infection is particularly harmful to infants, and putative virulence factors of prophage origin have been identified in C. sakazakii. In this study, the phage ENT39118 was isolated from wild-type C. sakazakii; it belongs to the family Siphoviridae. The genomic sequence of phage ENT39118 was composed of circular double-stranded DNA with a length of 39,012 bp. The sequence of ENT39118 showed weak sequence similarity to some reported regions of the prophage sequences in the C. sakazakii BAA-894 genome. To our knowledge, this is the first study of the genomic sequencing and annotation of this temperate phage, which was obtained from a C. sakazakii isolate from powdered infant formula.
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