Related Experiment Video
Updated: May 23, 2026

Conditional Knockdown of Gene Expression in Cancer Cell Lines to Study the Recruitment of Monocytes/Macrophages to the Tumor Microenvironment
Published on: November 23, 2017
ALEX1 suppresses colony formation ability of human colorectal carcinoma cell lines
Hiroyoshi Iseki1, Akihiko Takeda, Toshiwo Andoh
1Department of Digestive Surgery, Saitama International Medical Center, Saitama Medical University, Saitama, Japan.
Abstract:
Arm protein lost in epithelial cancers, on chromosome X (ALEX; also known as armadillo repeat containing, X-linked [ARMCX]) is a novel subgroup within the armadillo (ARM) family, which has several ARM repeat domains. The biological function of classical ARM family members such as β-catenin is well understood, but that of the ALEX/ARMCX family members is largely unknown. Here we evaluate the effects of ALEX1 overexpression on in vitro colony formation ability and expression of ALEX1 mRNA in human colorectal tumor. Overexpression of ALEX1 suppressed the anchorage-dependent and -independent colony formation of human colorectal carcinoma cell lines by the study of stable clones of HCT116 cells expressing ALEX1 protein. Bisulfite genomic sequencing revealed that the promoter region of ALEX1 gene was highly methylated in both HCT116 and SW480 cells in comparison with PANC-1 and MCF-7 cells, which express endogenous ALEX1 mRNA, indicating the capability of promoter methylation to silence ALEX1 gene in HCT116 and SW480 cells. Our current findings suggest that overexpression of ALEX1 play a negative role in human colorectal tumorigenesis.
Insights
Overexpression of ALEX1 (armadillo repeat containing, X-linked 1) suppresses colorectal tumor growth. Promoter methylation silences ALEX1, indicating a tumor-suppressive role in colorectal cancer.
Area of Science:
- Molecular Biology
- Cancer Research
- Epigenetics
Background:
- Armadillo repeat containing, X-linked (ARMCX) proteins are a novel subgroup of the armadillo (ARM) protein family.
- The functions of ARMCX family members, unlike classical ARM proteins like β-catenin, remain largely uncharacterized.
- Understanding ARMCX roles is crucial for advancing cancer research.
Purpose of the Study:
- To investigate the functional impact of ALEX1 (armadillo repeat containing, X-linked 1) overexpression in human colorectal carcinoma.
- To explore the correlation between ALEX1 gene expression and colorectal tumor formation.
- To identify potential epigenetic mechanisms regulating ALEX1 expression in cancer.
Main Methods:
- Stable clones of HCT116 cells overexpressing ALEX1 protein were generated.
- In vitro colony formation assays (anchorage-dependent and -independent) were performed.
- Bisulfite genomic sequencing was employed to analyze ALEX1 gene promoter methylation status.
Main Results:
- ALEX1 overexpression significantly suppressed both anchorage-dependent and -independent colony formation in colorectal carcinoma cell lines.
- High methylation levels were observed in the promoter region of the ALEX1 gene in HCT116 and SW480 cells.
- Conversely, PANC-1 and MCF-7 cells, which express endogenous ALEX1 mRNA, showed lower promoter methylation, suggesting gene silencing via methylation.
Conclusions:
- ALEX1 functions as a tumor suppressor in human colorectal cancer.
- Promoter methylation is a key mechanism for silencing ALEX1 expression in certain colorectal cancer cells.
- ALEX1 warrants further investigation as a potential therapeutic target in colorectal tumorigenesis.
Related Concept Videos
Abnormal Proliferation
Loss of Tumor Suppressor Gene Functions
When the tumor suppressor genes develop mutations or are lost, cells start growing out of control, leading to cancer. However, a single functional copy of the tumor suppressor gene is enough for the cells to maintain their normal functions and cell...
