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Updated: May 22, 2026

Cystic Fibrosis Aggregate Biofilm Model to Study Infection-relevant Gene Expression
Published on: April 18, 2025
A survey on pulmonary pathogens and their antibiotic susceptibility among cystic fibrosis patients
Ghamartaj Khanbabaee1, Majidreza Akbarizadeh, Aliakbar Sayyari
1Department Pediatric Respiratory Diseases, CF Center, Mofid Children Hospital, Shahid Beheshti University of Medical Sciences, Tehran, Iran. khanbabaeegh@yahoo.com
Objective:
This study was performed to investigate frequency and antimicrobial susceptibility of pulmonary pathogens in cystic fibrosis (CF) patients.
Methods:
129 pediatric patients with CF were enrolled in this cross-sectional study. Microbiological cultures were performed based on sputum or pharyngeal swabs. Antibiotic susceptibilities of the isolated bacteria were determined by the disk diffusion method.
Results:
The main infecting pathogens were Pseudomonas aeruginosa (38.8%), Klebsiella pneumoniae (11.6%) and Staphyloccus areus (9.3%), respectively. The most active antibiotics included rifampin (91.7% susceptibility), vancomycin (85%) and imipenem (83.5%). Emerging resistance against aminoglycosides was observed.
Conclusion:
Regarding in vitro susceptibility results, cyclic treatment of long-term oral azithromycin and inhaled tobramycin could prophylactically be applied, and during exacerbations, imipenem or ceftazidime in combination with an aminoglycoside such as amikacin could be considered the drugs of choice.
Insights
This study identified common lung bacteria in cystic fibrosis (CF) patients and their antibiotic resistance. Pseudomonas aeruginosa was most frequent, with rifampin and vancomycin showing high effectiveness against CF pathogens.
Area of Science:
- Medical Microbiology
- Pulmonology
- Infectious Diseases
Background:
- Cystic Fibrosis (CF) is a genetic disorder affecting multiple organs, primarily the lungs.
- Chronic pulmonary infections are a major cause of morbidity and mortality in CF patients.
- Understanding the spectrum of pulmonary pathogens and their antimicrobial susceptibility is crucial for effective treatment.
Purpose of the Study:
- To determine the frequency of pulmonary pathogens in pediatric cystic fibrosis patients.
- To assess the antimicrobial susceptibility patterns of these isolated pathogens.
- To inform optimal therapeutic strategies for CF-related lung infections.
Main Methods:
- A cross-sectional study involving 129 pediatric patients with CF.
- Microbiological cultures obtained from sputum or pharyngeal swabs.
- Antibiotic susceptibility testing performed using the disk diffusion method.
Main Results:
- Pseudomonas aeruginosa (38.8%) was the most prevalent pathogen, followed by Klebsiella pneumoniae (11.6%) and Staphylococcus aureus (9.3%).
- High in vitro susceptibility was observed for rifampin (91.7%), vancomycin (85%), and imipenem (83.5%).
- A concerning trend of emerging resistance to aminoglycosides was noted.
Conclusions:
- Cyclic oral azithromycin and inhaled tobramycin may be beneficial for prophylaxis in CF patients.
- For exacerbations, combination therapy with imipenem or ceftazidime and an aminoglycoside (e.g., amikacin) is recommended.
- These findings support evidence-based antimicrobial stewardship in cystic fibrosis care.
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