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Updated: May 22, 2026

Identification of Sleeping Beauty Transposon Insertions in Solid Tumors using Linker-mediated PCR
Published on: February 1, 2013
A Sleeping Beauty mutagenesis screen reveals a tumor suppressor role for Ncoa2/Src-2 in liver cancer
Kathryn A O'Donnell1, Vincent W Keng, Brian York
1Department of Molecular Biology and Genetics, The Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA. Kathryn.ODonnell@UTSouthwestern.edu
Abstract:
The Sleeping Beauty (SB) transposon mutagenesis system is a powerful tool that facilitates the discovery of mutations that accelerate tumorigenesis. In this study, we sought to identify mutations that cooperate with MYC, one of the most commonly dysregulated genes in human malignancy. We performed a forward genetic screen with a mouse model of MYC-induced liver cancer using SB-mediated mutagenesis. We sequenced insertions in 63 liver tumor nodules and identified at least 16 genes/loci that contribute to accelerated tumor development. RNAi-mediated knockdown in a liver progenitor cell line further validate three of these genes, Ncoa2/Src-2, Zfx, and Dtnb, as tumor suppressors in liver cancer. Moreover, deletion of Ncoa2/Src-2 in mice predisposes to diethylnitrosamine-induced liver tumorigenesis. These findings reveal genes and pathways that functionally restrain MYC-mediated liver tumorigenesis and therefore may provide targets for cancer therapy.
Insights
Researchers used the Sleeping Beauty (SB) transposon system to find mutations cooperating with MYC in liver cancer. They identified genes like Ncoa2/Src-2 that act as tumor suppressors, offering potential therapeutic targets.
Area of Science:
- Oncology
- Genetics
- Molecular Biology
Background:
- MYC is a frequently dysregulated gene in human cancers, driving tumorigenesis.
- Understanding cooperating mutations is crucial for developing effective cancer therapies.
Purpose of the Study:
- Identify mutations that accelerate MYC-driven liver cancer using Sleeping Beauty (SB) transposon mutagenesis.
- Validate identified genes as tumor suppressors in liver cancer.
Main Methods:
- Forward genetic screen in a mouse model of MYC-induced liver cancer.
- SB-mediated mutagenesis and sequencing of tumor insertions.
- RNAi-mediated knockdown and gene deletion studies in mice.
Main Results:
- Identified at least 16 genes/loci that accelerate MYC-driven liver tumor development.
- Validated Ncoa2/Src-2, Zfx, and Dtnb as tumor suppressors in liver cancer.
- Ncoa2/Src-2 deletion predisposed mice to chemically induced liver tumors.
Conclusions:
- Discovered genes and pathways that functionally restrain MYC-mediated liver tumorigenesis.
- These findings highlight potential therapeutic targets for liver cancer treatment.
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