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Related Concept Videos

IR Spectroscopy: Hooke's Law Approximation of Molecular Vibration01:16

IR Spectroscopy: Hooke's Law Approximation of Molecular Vibration

A covalently bonded heteronuclear diatomic molecule can be modeled as two vibrating masses connected by a spring. The vibrational frequency of the bond can be expressed using an equation derived from Hooke's law, which describes how the force applied to stretch or compress a spring is proportional to the displacement of the spring. In this case, the atoms behave like masses, and the bond acts like a spring.
According to Hooke's law, the vibrational frequency is directly proportional to the...
IR Spectroscopy: Molecular Vibration Overview01:24

IR Spectroscopy: Molecular Vibration Overview

When Infrared (IR) radiation passes through a covalently bonded molecule, the bonds transition from lower to higher vibrational levels. The fundamental vibrational motions that result in infrared absorption can be classified as stretching or bending vibrations.
Stretching vibrations are vibrational motions that occur along the bond line, changing the bond length or distance between two bonded atoms. They are further distinguished as symmetric or asymmetric. In symmetric stretching, the...
UV–Vis Spectroscopy of Conjugated Systems01:32

UV–Vis Spectroscopy of Conjugated Systems

Organic compounds with conjugated double bonds show strong absorption features in the UV–visible region of the electromagnetic spectrum attributed to π → π* electronic excitations. Generally, a UV–vis absorption spectrum is recorded as a plot of absorbance vs wavelength. The wavelength of maximum absorbance, which manifests as a peak in the absorption spectrum, is denoted as λmax.
One of the factors influencing λmax is the extent of conjugation in the...
IR and UV–Vis Spectroscopy of Aldehydes and Ketones01:29

IR and UV–Vis Spectroscopy of Aldehydes and Ketones

Infrared spectroscopy, also known as vibrational spectroscopy, is mainly used to determine the types of bonds and functional groups in molecules. In aldehydes and ketones, the carbonyl (C=O) bond shows an absorption around 1710 cm-1. The C=O bond vibration of an aldehyde occurs at lower frequencies than that of a ketone. In addition to the C=O absorption in an aldehyde, the aldehydic C–H bond also gives two peaks in the 2700–2800 cm-1 range. This absorption, coupled with the C=O stretching, is...
UV–Vis Spectroscopy: Molecular Electronic Transitions01:16

UV–Vis Spectroscopy: Molecular Electronic Transitions

In Ultraviolet–Visible (UV–Vis) spectroscopy, the absorption of electromagnetic radiation is used to probe the electronic structure of molecules. This technique provides insights into molecular electronic transitions, particularly the movement of electrons between different molecular orbitals. Radiation is absorbed if the energy of the electromagnetic radiation passing through the molecule is precisely equal to the energy difference between the excited and ground states. During this process,...
Raman Spectroscopy: Overview01:20

Raman Spectroscopy: Overview

The underlying principle of Raman spectroscopy is based on the interaction between light and matter, specifically molecules' inelastic scattering of photons. When a monochromatic beam of light, typically from a laser source, interacts with a sample, most scattered light has the same frequency as the incident light. This is known as Rayleigh scattering.
However, a small fraction of the scattered light exhibits a frequency shift due to the exchange of energy between the incident photons and the...

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Updated: May 22, 2026

Interfacial Molecular-level Structures of Polymers and Biomacromolecules Revealed via Sum Frequency Generation Vibrational Spectroscopy
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Interfacial Molecular-level Structures of Polymers and Biomacromolecules Revealed via Sum Frequency Generation Vibrational Spectroscopy

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Monosaccharide-water complexes: vibrational spectroscopy and anharmonic potentials.

Lin Jin1, John P Simons, R Benny Gerber

  • 1Department of Chemistry, University of California, Irvine, California 92697-2025, USA.

The Journal of Physical Chemistry. A
|May 8, 2012
PubMed
Summary

Ab initio vibrational self-consistent field (VSCF) calculations accurately predict vibrational spectra for monosaccharide·D(2)O complexes. These findings enhance understanding of carbohydrate interactions and support future spectroscopic assignments.

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Area of Science:

  • Computational Chemistry
  • Spectroscopy
  • Carbohydrate Chemistry

Background:

  • Monosaccharide complexes play crucial roles in biological systems.
  • Accurate vibrational spectra are essential for structural elucidation and understanding intermolecular interactions.
  • Previous computational methods have limitations in reproducing experimental vibrational data.

Purpose of the Study:

  • To predict and analyze the vibrational spectra of various monosaccharide·D(2)O complexes using advanced computational methods.
  • To assess the accuracy of ab initio vibrational self-consistent field (VSCF) calculations, including anharmonic corrections (VSCF-PT2), against experimental data.
  • To provide a robust computational framework for the assignment of vibrational spectra and the study of carbohydrate interactions.

Main Methods:

  • Ab initio vibrational self-consistent field (VSCF) calculations were performed.
  • Anharmonic VSCF-PT2 frequencies were computed using hybrid HF/MP2 potentials.
  • Calculated spectra were compared with experimental data for phenyl-tagged monosaccharide·D(2)O complexes.

Main Results:

  • High accuracy was achieved, with average discrepancies between calculated and experimental frequencies around 1.0-1.5%.
  • The VSCF-PT2 method effectively reproduced vibrational anharmonicities.
  • The study validated the use of first-principles spectroscopic calculations without empirical scaling.

Conclusions:

  • Ab initio VSCF calculations provide highly accurate vibrational spectra for monosaccharide·D(2)O complexes.
  • These computational methods are reliable for assigning vibrational spectra of carbohydrates.
  • The study enhances the understanding of intra- and intermolecular interactions in carbohydrate systems.