Related Experiment Video
Updated: May 22, 2026

Identification of Rare Bacterial Pathogens by 16S rRNA Gene Sequencing and MALDI-TOF MS
Published on: July 11, 2016
Isolation, identification & characterization of Proteus penneri--a missed rare pathogen
1Department of Microbiology, Sanjay Gandhi Post-Graduate Institute of Medical Sciences, Lucknow, India. janaksgpi@yahoo.co.in
Background & Objectives:
Indole negative Proteus species are invariably incorrectly identified as P. mirabilis, missing isolates of Proteus penneri. P. penneri is an invasive pathogen capable of causing major infectious diseases still seldom reported in individual cases. We report here the isolation, differentiation, characterization and typing of P. penneri from patients with different clinical infections.
Methods:
Urine, pus and body fluids collected from patients in intensive care units, wards and out patients departments of a tertiary health care institute from north India were cultured. A total of 61 indole negative Proteus isolates were subjected to extended biochemical tests to differentiate and identify P. penneri from P. mirabilis including failure to produce ornithine decarboxylase (by 0% strains of P. penneri and 100% strains of P. mirabilis) besides P. penneri being uniformly salicin negative, non-utilizer of citrate but ferments sucrose and maltose. Antibiograms and Dienes phenomenon were performed to characterize and type P. penneri isolates besides screening for β-lactamase production.
Results:
Eight isolates of P. penneri were identified; four from urine, three from abdominal drain-fluid and one from diabetic foot ulcer. P. penneri was isolated as the sole pathogen in all patients having underlying disease; post-operatively. Swarming was not seen in the first strain on primary isolation and was poor in strain-4. All eight isolates were biochemically homologous but multi-drug resistant (MDR) with resistance to 6-8 drugs (up to 12). β-lactamase production was seen in three of five isolates while Dienes phenomenon found four distinct types and discriminated strains differing in resistance even with a single drug.
Interpretation & Conclusions:
A few additional biochemical tests identified P. penneri isolates; it infected patients with underlying disease and strains were MDR and heterogenous.
Insights
Accurate identification of indole-negative Proteus species, like Proteus penneri, is crucial. This study differentiated P. penneri from P. mirabilis, revealing drug-resistant and heterogeneous strains in clinical infections.
Area of Science:
- Medical Microbiology
- Clinical Infectious Diseases
- Bacterial Pathogenesis
Background:
- Indole-negative Proteus species are often misidentified as P. mirabilis, leading to missed P. penneri infections.
- P. penneri is an invasive pathogen causing significant infectious diseases, though rarely reported individually.
- This study focuses on the isolation and characterization of P. penneri from diverse clinical samples.
Purpose of the Study:
- To develop accurate methods for differentiating P. penneri from P. mirabilis.
- To characterize the clinical isolates of P. penneri, including their resistance patterns and typing.
- To highlight the clinical significance of P. penneri as an opportunistic pathogen.
Main Methods:
- Culturing of clinical samples (urine, pus, body fluids) from intensive care and outpatient settings.
- Extended biochemical testing, including ornithine decarboxylase, salicin fermentation, citrate utilization, sucrose, and maltose fermentation.
- Antibiogram analysis, Dienes phenomenon for typing, and screening for beta-lactamase production.
Main Results:
- Eight P. penneri isolates were identified from urine, abdominal fluid, and diabetic foot ulcers.
- All isolates were associated with patients having underlying conditions, often post-operatively.
- Isolates exhibited multi-drug resistance (MDR), with resistance to 6-8 drugs, and heterogeneity was observed through Dienes phenomenon typing.
Conclusions:
- Additional biochemical tests effectively identified P. penneri, distinguishing it from P. mirabilis.
- P. penneri infections occurred in patients with underlying diseases.
- Identified P. penneri strains were multi-drug resistant and heterogeneous, necessitating careful clinical management.
Related Concept Videos
Methods of Classification and Identification
Atypical Pneumonia
