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Updated: May 22, 2026

In vitro Investigation of the MexAB Efflux Pump From Pseudomonas aeruginosa
Published on: February 17, 2014
Mutations in MexB that affect the efflux of antibiotics with cytoplasmic targets
Thelma Ohene-Agyei1, Jon D Lea, Henrietta Venter
1Department of Pharmacology, University of Cambridge, Cambridge, UK.
Abstract:
Drug efflux pumps such as MexAB-OprM from Pseudomonas aeruginosa confer resistance to a wide range of chemically different compounds. Within the tripartite assembly, the inner membrane protein MexB is mainly responsible for substrate recognition. Recently, considerable advances have been made in elucidating the drug efflux pathway through the large periplasmic domains of resistance-nodulation-division (RND) transporters. However, little is known about the role of amino acids in other parts of the protein. We have investigated the role of two conserved phenylalanine residues that are aligned around the cytoplasmic side of the central cavity of MexB. The two conserved phenylalanine residues have been mutated to alanine residues (FAFA MexB). The interaction of the wild-type and mutant proteins with a variety of drugs from different classes was investigated by assays of cytotoxicity and drug transport. The FAFA mutation affected the efflux of compounds that have targets inside the cell, but antibiotics that act on cell wall synthesis and membrane probes were unaffected. Combined, our results indicate the presence of a hitherto unidentified cytoplasmic-binding site in RND drug transporters and enhance our understanding of the molecular mechanisms that govern drug resistance in Gram-negative pathogens.
Insights
Mutations in Pseudomonas aeruginosa MexB protein reveal a new cytoplasmic-binding site in resistance-nodulation-division (RND) drug efflux pumps. This finding enhances understanding of drug resistance mechanisms in Gram-negative pathogens.
Area of Science:
- Microbiology
- Molecular Biology
- Biochemistry
Background:
- Pseudomonas aeruginosa utilizes MexAB-OprM efflux pumps for multidrug resistance.
- Inner membrane protein MexB plays a key role in substrate recognition within the MexAB-OprM system.
- Existing research primarily focuses on the periplasmic domains of RND transporters, leaving cytoplasmic regions less understood.
Purpose of the Study:
- To investigate the role of conserved phenylalanine residues in the cytoplasmic region of MexB.
- To determine the impact of specific mutations on MexB's drug interaction and efflux capabilities.
- To identify potential novel drug-binding sites within RND transporters.
Main Methods:
- Site-directed mutagenesis was used to create the FAFA MexB mutant.
- Cytotoxicity assays were performed to assess the interaction of wild-type and mutant MexB with various drugs.
- Drug transport assays were conducted to evaluate the efflux activity of the modified protein.
Main Results:
- The FAFA mutation in MexB specifically impacted the efflux of intracellularly targeted compounds.
- Efflux of cell wall synthesis inhibitors and membrane probes remained unaffected by the FAFA mutation.
- These findings suggest the existence of a previously unrecognized cytoplasmic-binding site in RND transporters.
Conclusions:
- The study identifies a novel cytoplasmic-binding site in RND drug efflux transporters.
- Understanding this site is crucial for deciphering drug resistance mechanisms in Gram-negative bacteria.
- This research provides new insights into the molecular basis of multidrug resistance.
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