Related Experiment Video
Updated: May 22, 2026

Sequencing of Bacterial Microflora in Peripheral Blood: our Experience with HIV-infected Patients
Published on: June 11, 2011
Associations between potential bacterial pathogens in the nasopharynx of HIV infected children
Sangeeta Das Bhattacharya1, Swapan Kumar Niyogi, Subhasish Bhattacharyya
1School of Medical Science and Technology, Indian Institute of Technology, Kharagpur, West Bengal 721302, India. sangeetab@iitkgp.ac.in
Insights
In HIV-infected children, nasopharyngeal carriage of Streptococcus pneumoniae and Haemophilus influenzae showed a strong positive association, unlike in healthy populations. This finding is crucial for understanding invasive disease risks in this vulnerable group.
Area of Science:
- Pediatric infectious diseases
- HIV/AIDS research
- Microbiology
Background:
- Children with HIV infection are at increased risk for bacterial infections.
- Nasopharyngeal carriage of common respiratory pathogens is a key factor in disease transmission and invasiveness.
- Understanding bacterial co-colonization patterns in immunocompromised children is crucial for public health strategies.
Purpose of the Study:
- To investigate the co-colonization patterns of Streptococcus pneumoniae, Staphylococcus aureus, and Haemophilus influenzae in the nasopharynx of children with HIV.
- To determine if factors like antiretroviral therapy (ART), cotrimoxazole prophylaxis, or malnutrition influence bacterial carriage.
Main Methods:
- A cross-sectional study involving nasopharyngeal swabs from 148 children with HIV in West Bengal.
- Prevalence of S. pneumoniae, S. aureus, and H. influenzae colonization was determined.
- Statistical analysis was performed to identify associations between colonization and various factors.
Main Results:
- Prevalence rates were: S. pneumoniae (28%), S. aureus (24%), and H. influenzae (26%).
- Dual colonization was observed in 11% (S. pneumoniae/H. influenzae), 8.8% (S. pneumoniae/S. aureus), and 4% (S. aureus/H. influenzae). Triple carriage occurred in 2%.
- A strong positive association was found between H. influenzae and S. pneumoniae carriage. Malnutrition was negatively associated with H. influenzae colonization. ART and cotrimoxazole did not affect colonization.
Conclusions:
- The typical negative association between S. pneumoniae and S. aureus colonization was absent in this HIV-infected cohort.
- A significant positive association between H. influenzae and S. pneumoniae carriage highlights unique microbial dynamics in children with HIV.
- These findings offer critical insights into the elevated risk of invasive diseases caused by these bacteria in HIV-infected children.
Objective:
To investigate bacterial associations of S. pneumoniae, S. aureus, and H. influenzae in the nasopharynx of ambulatory children with HIV infection.
Methods:
A cross-sectional nasopharyngeal swab survey of 148 children with HIV infection from West Bengal presenting for routine outpatient care was conducted.
Results:
Forty-one (28 %) children carried S. pneumoniae, 35 (24 %) carried S. aureus and 39 (26 %) carried H. influenzae. Seventeen (11 %) had dual colonization with S. pneumoniae and H. influenzae, 13(8.8 %) had dual colonization with S. pneumoniae and S. aureus, and 6(4 %) had dual colonization with S. aureus and H. influenzae. Three (2 %) had triple carriage with H. influenzae, S. aureus, and S. pneumoniae. Neither Cotrimoxazole prophylaxis nor ART (antiretroviral therapy) affected colonization with any organism. There was no association between HIV immune status, recent antibiotic use, exposure to other children, household tuberculosis exposure and colonization with any organism. There was a strong negative association between malnutrition and colonization with H. influenzae.
Conclusions:
The negative association between S. pneumoniae and S. aureus colonization in the nasopharynx described in healthy populations was not present. The authors found a strong positive association between carriage with H. influenzae and S. pneumoniae. These findings provide insight into the increased risk of invasive disease from these organisms in HIV infected children.
Related Concept Videos
Microbiota of the Respiratory Tract
Bacterial Meningitis II: Pathophysiology
Development of the Oral Microbiota
Human Virome
Pneumonia I: Introduction
Risk Factors
Various factors influence the likelihood of developing pneumonia. Age plays a crucial role, with infants, children under two, and individuals over 65 at increased risk due to their...
Defense Against Bacterial Pathogens
Phagocytes
Phagocytes are the frontline soldiers of the immune system. They include neutrophils and macrophages. Neutrophils are the most abundant type of white blood cell and are quickly mobilized to the site of infection. Macrophages are larger cells that patrol...

