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Related Concept Videos

MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA ends...
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA ends...
siRNA - Small Interfering RNAs02:30

siRNA - Small Interfering RNAs

Small interfering RNAs, or siRNAs, are short regulatory RNA molecules that can silence genes post-transcriptionally, as well as the transcriptional level in some cases. siRNAs are important for protecting cells against viral infections and silencing transposable genetic elements.
In the cytoplasm, siRNA is processed from a double-stranded RNA, which comes from either endogenous DNA transcription or exogenous sources like a virus. This double-stranded RNA is then cleaved by the ATP-dependent...
Experimental RNAi02:15

Experimental RNAi

RNA interference (RNAi) is a cellular mechanism that inhibits gene expression by suppressing its transcription or activating the RNA degradation process. The mechanism was discovered by Andrew Fire and Craig Mello in 1998 in plants. Today, it is observed in almost all eukaryotes, including protozoa, flies, nematodes, insects, parasites, and mammals. This precise cellular mechanism of gene silencing has been developed into a technique that provides an efficient way to identify and determine the...
RNA Interference01:23

RNA Interference

RNA interference (RNAi) is a process in which a small non-coding RNA molecule blocks the post-transcriptional expression of a gene by binding to its messenger RNA (mRNA) and preventing the protein from being translated.
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...

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MicroRNA-based Regulation of Picornavirus Tropism
09:05

MicroRNA-based Regulation of Picornavirus Tropism

Published on: February 6, 2017

Efficiency and specificity in microRNA biogenesis.

Omer Barad1, Mati Mann, Elik Chapnik

  • 1Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.

Nature Structural & Molecular Biology
|May 15, 2012
PubMed
Summary

The Microprocessor complex, essential for microRNA biogenesis, balances its activity through autoregulatory feedback. This feedback tunes Microprocessor levels to ensure efficient and specific cleavage of pri-miRNA substrates.

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Area of Science:

  • Molecular Biology
  • Gene Regulation
  • Biochemistry

Background:

  • The Drosha-Dgcr8 'Microprocessor' complex initiates microRNA biogenesis through primary microRNA (pri-miRNA) cleavage.
  • The Microprocessor complex may exhibit non-specific cleavage activity on other nuclear RNAs, raising questions about its specificity.
  • Understanding the regulation of Microprocessor activity is crucial for comprehending microRNA production and function.

Purpose of the Study:

  • To investigate the regulatory mechanisms governing the specificity and efficiency of the Microprocessor complex.
  • To elucidate the role of autoregulatory feedback in Microprocessor function.
  • To determine how Microprocessor levels are balanced with pri-miRNA substrate availability.

Main Methods:

  • Utilized mathematical modeling to simulate Microprocessor complex dynamics.
  • Conducted experimental studies in both mouse and human tissues.
  • Analyzed the relationship between Microprocessor expression levels and pri-miRNA substrate concentrations.

Main Results:

  • Identified autoregulatory feedback on Microprocessor expression as a key regulatory mechanism.
  • Demonstrated that this feedback is instrumental in balancing Microprocessor activity.
  • Showed that Microprocessor levels are effectively tuned to pri-miRNA substrate levels for optimal function.

Conclusions:

  • Autoregulatory feedback is critical for maintaining the specificity and efficiency of the Microprocessor complex.
  • Tuning Microprocessor levels to substrate availability ensures accurate microRNA biogenesis.
  • This regulatory mechanism prevents non-specific RNA cleavage and ensures proper gene regulation.