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Updated: May 22, 2026

A Colorimetric Assay that Specifically Measures Granzyme B Proteolytic Activity: Hydrolysis of Boc-Ala-Ala-Asp-S-Bzl
Published on: November 28, 2014
All human granzymes target hnRNP K that is essential for tumor cell viability
Robert van Domselaar1, Razi Quadir, Astrid M van der Made
1Department of Pathology, University Medical Center Utrecht, 3584 CX, Utrecht, The Netherlands.
Abstract:
Granule exocytosis by cytotoxic lymphocytes is the key mechanism to eliminate virus-infected cells and tumor cells. These lytic granules contain the pore-forming protein perforin and a set of five serine proteases called granzymes. All human granzymes display distinct substrate specificities and induce cell death by cleaving critical intracellular death substrates. In the present study, we show that all human granzymes directly cleaved the DNA/RNA-binding protein heterogeneous nuclear ribonucleoprotein K (hnRNP K), designating hnRNP K as the first known pan-granzyme substrate. Cleavage of hnRNP K was more efficient in the presence of RNA and occurred in two apparent proteolysis-sensitive amino acid regions, thereby dissecting the functional DNA/RNA-binding hnRNP K domains. HnRNP K was cleaved under physiological conditions when purified granzymes were delivered into living tumor cells and during lymphokine-activated killer cell-mediated attack. HnRNP K is essential for tumor cell viability, since knockdown of hnRNP K resulted in spontaneous tumor cell apoptosis with caspase activation and reactive oxygen species production. This apoptosis was more pronounced at low tumor cell density where hnRNP K knockdown also triggered a caspase-independent apoptotic pathway. This suggests that hnRNP K promotes tumor cell survival in the absence of cell-cell contact. Silencing of hnRNP K protein expression rendered tumor cells more susceptible to cellular cytotoxicity. We conclude that hnRNP K is indispensable for tumor cell viability and our data suggest that targeting of hnRNP K by granzymes contributes to or reinforces the cell death mechanisms by which cytotoxic lymphocytes eliminate tumor cells.
Insights
Cytotoxic lymphocytes use granzymes to induce cell death. This study identifies heterogeneous nuclear ribonucleoprotein K (hnRNP K) as a pan-granzyme substrate, crucial for tumor cell survival and targeted by granzymes for elimination.
Area of Science:
- Immunology
- Molecular Biology
- Cell Biology
Background:
- Cytotoxic lymphocytes eliminate target cells via granule exocytosis.
- Lytic granules contain perforin and granzymes, serine proteases that induce cell death.
- Granzymes cleave intracellular substrates to trigger apoptosis.
Purpose of the Study:
- Identify novel substrates of human granzymes.
- Investigate the role of heterogeneous nuclear ribonucleoprotein K (hnRNP K) in granzyme-mediated cell death.
- Determine the impact of hnRNP K on tumor cell viability and susceptibility to cytotoxic lymphocytes.
Main Methods:
- In vitro cleavage assays with purified granzymes and hnRNP K.
- Delivery of granzymes into living tumor cells.
- Knockdown of hnRNP K expression in tumor cells.
- Assessment of apoptosis, caspase activation, and reactive oxygen species production.
Main Results:
- All human granzymes directly cleaved hnRNP K, identifying it as a pan-granzyme substrate.
- hnRNP K cleavage occurred in specific proteolysis-sensitive regions, dissecting its DNA/RNA-binding domains.
- hnRNP K knockdown induced spontaneous tumor cell apoptosis, enhancing susceptibility to cytotoxic lymphocytes.
- hnRNP K knockdown promoted apoptosis independently of cell-cell contact.
Conclusions:
- hnRNP K is the first identified pan-granzyme substrate, essential for tumor cell viability.
- Granzyme-mediated cleavage of hnRNP K contributes to cytotoxic lymphocyte-induced tumor cell death.
- Targeting hnRNP K represents a potential strategy to enhance anti-tumor immunity.
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