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Related Concept Videos

Conserved Binding Sites01:49

Conserved Binding Sites

Many proteins’ biological role depends on their interactions with their ligands, small molecules that bind to specific locations on the protein known as ligand-binding sites. Ligand-binding sites are often conserved among homologous proteins as these sites are critical for protein function.
Binding sites are often located in large pockets, and if their location on a protein’s surface is unknown, it can be predicted using various approaches. The energetic method computationally analyses the...
Conserved Binding Sites01:49

Conserved Binding Sites

Many proteins’ biological role depends on their interactions with their ligands, small molecules that bind to specific locations on the protein known as ligand-binding sites. Ligand-binding sites are often conserved among homologous proteins as these sites are critical for protein function.
Binding sites are often located in large pockets, and if their location on a protein’s surface is unknown, it can be predicted using various approaches. The energetic method computationally analyses the...
Ligand Binding and Linkage00:49

Ligand Binding and Linkage

Allosteric proteins have more than one ligand binding site; the binding of a ligand to any of these sites influences the binding of ligands to the other sites. When a protein is allosteric, its binding sites are called coupled or linked.  In the case of enzymes, the site that binds to the substrate is known as the active site and the other site is known as the regulatory site. When a ligand binds to the regulatory site, this leads to conformational changes in the protein that can influence the...
Ligand Binding and Linkage00:49

Ligand Binding and Linkage

Allosteric proteins have more than one ligand binding site; the binding of a ligand to any of these sites influences the binding of ligands to the other sites. When a protein is allosteric, its binding sites are called coupled or linked.  In the case of enzymes, the site that binds to the substrate is known as the active site and the other site is known as the regulatory site. When a ligand binds to the regulatory site, this leads to conformational changes in the protein that can influence the...
The Equilibrium Binding Constant and Binding Strength02:18

The Equilibrium Binding Constant and Binding Strength

The equilibrium binding constant (Kb) quantifies the strength of a protein-ligand interaction. Kb can be calculated as follows when the reaction is at equilibrium:
The Equilibrium Binding Constant and Binding Strength02:18

The Equilibrium Binding Constant and Binding Strength

The equilibrium binding constant (Kb) quantifies the strength of a protein-ligand interaction. Kb can be calculated as follows when the reaction is at equilibrium:

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Related Experiment Video

Updated: May 22, 2026

Exploring Sequence Space to Identify Binding Sites for Regulatory RNA-Binding Proteins
11:34

Exploring Sequence Space to Identify Binding Sites for Regulatory RNA-Binding Proteins

Published on: August 9, 2019

The feature-binding problem is an ill-posed problem.

Vincent Di Lollo1

  • 1Department of Psychology, Simon Fraser University, Burnaby, BC V5A1S6, Canada. enzo@sfu.ca

Trends in Cognitive Sciences
|May 19, 2012
PubMed
Summary
This summary is machine-generated.

The visual binding problem is ill-posed because brain modules code multiple features jointly. A hierarchical reentrant system explains object perception without a separate binding process, leading to conscious awareness.

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Last Updated: May 22, 2026

Exploring Sequence Space to Identify Binding Sites for Regulatory RNA-Binding Proteins
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Exploring Sequence Space to Identify Binding Sites for Regulatory RNA-Binding Proteins

Published on: August 9, 2019

Irrelevant Stimuli and Action Control: Analyzing the Influence of Ignored Stimuli via the Distractor-Response Binding Paradigm
12:12

Irrelevant Stimuli and Action Control: Analyzing the Influence of Ignored Stimuli via the Distractor-Response Binding Paradigm

Published on: May 14, 2014

Computational Prediction of Amino Acid Preferences of Potentially Multispecific Peptide-Binding Domains Involved in Protein-Protein Interactions
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Computational Prediction of Amino Acid Preferences of Potentially Multispecific Peptide-Binding Domains Involved in Protein-Protein Interactions

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Area of Science:

  • Neuroscience
  • Cognitive Science
  • Visual Perception

Background:

  • The visual binding problem addresses how distinct features (color, orientation) are integrated into unified percepts.
  • Traditional models assumed independent brain modules for feature coding, posing a challenge for integration.

Purpose of the Study:

  • To argue that the feature-binding problem is ill-posed.
  • To propose a hierarchical reentrant system to explain the emergence of coherent visual objects.

Main Methods:

  • Theoretical analysis of existing neuroscience findings on feature coding.
  • Conceptual modeling of a hierarchical reentrant system for visual perception.

Main Results:

  • Brain modules are now understood to code for multiple features simultaneously, making the feature-binding problem moot.
  • A hierarchical reentrant system involves feed-forward sweeps and descending correlations to form object percepts.

Conclusions:

  • Conscious awareness arises from the highest correlating hypothesis in a hierarchical reentrant system.
  • This model eliminates the need for a distinct binding process, proposing that object perception emerges from feature integration within the system.