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Updated: May 22, 2026

Studying Triple Negative Breast Cancer Using Orthotopic Breast Cancer Model
Published on: March 20, 2020
Targeting triple-negative breast cancer cells with the histone deacetylase inhibitor panobinostat
Chandra R Tate1, Lyndsay V Rhodes, H Chris Segar
1Department of Medicine, Section of Hematology and Medical Oncology, Tulane University Health Sciences Center, 1430 Tulane Ave, New Orleans, LA 70112, USA.
Introduction:
Of the more than one million global cases of breast cancer diagnosed each year, approximately fifteen percent are characterized as triple-negative, lacking the estrogen, progesterone, and Her2/neu receptors. Lack of effective therapies, younger age at onset, and early metastatic spread have contributed to the poor prognoses and outcomes associated with these malignancies. Here, we investigate the ability of the histone deacetylase inhibitor panobinostat (LBH589) to selectively target triple-negative breast cancer (TNBC) cell proliferation and survival in vitro and tumorigenesis in vivo.
Methods:
TNBC cell lines MDA-MB-157, MDA-MB-231, MDA-MB-468, and BT-549 were treated with nanomolar (nM) quantities of panobinostat. Relevant histone acetylation was verified by flow cytometry and immunofluorescent imaging. Assays for trypan blue viability, 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) proliferation, and DNA fragmentation were used to evaluate overall cellular toxicity. Changes in cell cycle progression were assessed with propidium iodide flow cytometry. Additionally, qPCR arrays were used to probe MDA-MB-231 cells for panobinostat-induced changes in cancer biomarkers and signaling pathways. Orthotopic MDA-MB-231 and BT-549 mouse xenograft models were used to assess the effects of panobinostat on tumorigenesis. Lastly, flow cytometry, ELISA, and immunohistochemical staining were applied to detect changes in cadherin-1, E-cadherin (CDH1) protein expression and the results paired with confocal microscopy in order to examine changes in cell morphology.
Results:
Panobinostat treatment increased histone acetylation, decreased cell proliferation and survival, and blocked cell cycle progression at G2/M with a concurrent decrease in S phase in all TNBC cell lines. Treatment also resulted in apoptosis induction at 24 hours in all lines except the MDA-MB-468 cell line. MDA-MB-231 and BT-549 tumor formation was significantly inhibited by panobinostat (10 mg/kg/day) in mice. Additionally, panobinostat up-regulated CDH1 protein in vitro and in vivo and induced cell morphology changes in MDA-MB-231 cells consistent with reversal of the mesenchymal phenotype.
Conclusions:
This study revealed that panobinostat is overtly toxic to TNBC cells in vitro and decreases tumorigenesis in vivo. Additionally, treatment up-regulated anti-proliferative, tumor suppressor, and epithelial marker genes in MDA-MB-231 cells and initiated a partial reversal of the epithelial-to-mesenchymal transition. Our results demonstrate a potential therapeutic role of panobinostat in targeting aggressive triple-negative breast cancer cell types.
Insights
Panobinostat effectively targets triple-negative breast cancer (TNBC) by reducing cell proliferation and tumor growth. This histone deacetylase inhibitor shows promise as a therapeutic agent for aggressive TNBC, demonstrating significant anti-cancer effects in vitro and in vivo.
Area of Science:
- Oncology
- Molecular Biology
- Cancer Therapeutics
Background:
- Triple-negative breast cancer (TNBC) accounts for over 15% of breast cancer cases, characterized by a lack of key receptors and poor prognoses.
- Effective therapeutic strategies for TNBC remain limited due to aggressive tumor behavior and early metastasis.
Purpose of the Study:
- To investigate the efficacy of panobinostat, a histone deacetylase inhibitor, in targeting TNBC cell proliferation and survival.
- To evaluate the in vivo effects of panobinostat on TNBC tumorigenesis.
Main Methods:
- In vitro studies utilized TNBC cell lines treated with panobinostat, assessing viability, proliferation, cell cycle, and apoptosis.
- In vivo studies employed mouse xenograft models to evaluate panobinostat's impact on tumor growth.
- Analysis included molecular assessments of histone acetylation, gene expression, and protein markers like E-cadherin (CDH1).
Main Results:
- Panobinostat demonstrated significant toxicity to TNBC cells in vitro, inhibiting proliferation and inducing apoptosis.
- In vivo studies showed substantial inhibition of tumor formation in TNBC xenograft models.
- Treatment with panobinostat led to increased histone acetylation, up-regulated CDH1 expression, and promoted a shift from mesenchymal to epithelial phenotype.
Conclusions:
- Panobinostat exhibits potent anti-cancer activity against TNBC cells both in vitro and in vivo.
- The drug up-regulates tumor suppressor and epithelial markers, partially reversing the epithelial-to-mesenchymal transition.
- These findings highlight panobinostat's potential as a therapeutic agent for aggressive triple-negative breast cancer.
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