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Updated: May 22, 2026

Multiplex PCR and Reverse Line Blot Hybridization Assay (mPCR/RLB)
Published on: August 6, 2011
Molecular characterization of the 2011 Hong Kong scarlet fever outbreak
Herman Tse1, Jessie Y J Bao, Mark R Davies
1Department of Microbiology, The University of Hong Kong, Hong Kong Special Administrative Region, China. htse@hkucc.hku.hk
Abstract:
A scarlet fever outbreak occurred in Hong Kong in 2011. The majority of cases resulted in the isolation of Streptococcus pyogenes emm12 with multiple antibiotic resistances. Phylogenetic analysis of 22 emm12 scarlet fever outbreak isolates, 7 temporally and geographically matched emm12 non-scarlet fever isolates, and 18 emm12 strains isolated during 2005-2010 indicated the outbreak was multiclonal. Genome sequencing of 2 nonclonal scarlet fever isolates (HKU16 and HKU30), coupled with diagnostic polymerase chain reaction assays, identified 2 mobile genetic elements distributed across the major lineages: a 64.9-kb integrative and conjugative element encoding tetracycline and macrolide resistance and a 46.4-kb prophage encoding superantigens SSA and SpeC and the DNase Spd1. Phenotypic comparison of HKU16 and HKU30 with the S. pyogenes M1T1 strain 5448 revealed that HKU16 displays increased adherence to HEp-2 human epithelial cells, whereas HKU16, HKU30, and 5448 exhibit equivalent resistance to neutrophils and virulence in a humanized plasminogen murine model. However, in contrast to M1T1, the virulence of HKU16 and HKU30 was not associated with covRS mutation. The multiclonal nature of the emm12 scarlet fever isolates suggests that factors such as mobile genetic elements, environmental factors, and host immune status may have contributed to the 2011 scarlet fever outbreak.
Insights
The 2011 Hong Kong scarlet fever outbreak involved multidrug-resistant Streptococcus pyogenes emm12 strains. Mobile genetic elements, not covRS mutations, likely contributed to virulence, suggesting complex outbreak drivers.
Area of Science:
- Microbiology
- Genetics
- Epidemiology
Background:
- Scarlet fever outbreaks pose public health challenges.
- Streptococcus pyogenes emm12 strains were implicated in a 2011 Hong Kong outbreak.
- Multiple antibiotic resistances were observed in outbreak isolates.
Purpose of the Study:
- To investigate the genetic basis and contributing factors of the 2011 emm12 scarlet fever outbreak in Hong Kong.
- To analyze the phylogenetic relationships of outbreak and non-outbreak strains.
- To identify mobile genetic elements associated with virulence and resistance.
Main Methods:
- Phylogenetic analysis of emm12 Streptococcus pyogenes isolates.
- Whole-genome sequencing of representative isolates.
- Diagnostic polymerase chain reaction assays.
- Phenotypic characterization including adherence, neutrophil resistance, and murine models.
Main Results:
- The 2011 outbreak was multiclonal, involving multiple emm12 lineages.
- Two mobile genetic elements were identified: a conjugative element conferring antibiotic resistance and a prophage encoding virulence factors.
- Virulence in outbreak strains was not linked to covRS mutations, unlike the M1T1 strain.
- Increased adherence was observed in one isolate (HKU16).
Conclusions:
- The multiclonal nature of the outbreak suggests diverse contributing factors.
- Mobile genetic elements play a significant role in the emergence and virulence of Streptococcus pyogenes.
- Environmental and host factors may also influence scarlet fever outbreaks.
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