Interstitial 9q34.11-q34.13 deletion in a patient with severe intellectual disability, hydrocephalus, and cleft
Andreas Tzschach1, Ute Grasshoff, Karin Schäferhoff
1Institute of Human Genetics, University of Tuebingen, Tuebingen, Germany. andreas.tzschach@med.uni-tuebingen.de
Insights
Rare interstitial deletions in chromosome 9q34.11-q34.13 can cause severe developmental issues. This report details a patient with a 3.7 Mb deletion, highlighting the need for further research into 9q34.11-q34.13 aberrations.
Area of Science:
- Genetics
- Human Genetics
- Genomic Medicine
Background:
- Interstitial deletions of chromosome bands 9q34.11-q34.13 are infrequently documented.
- Understanding the genetic basis of complex congenital disorders is crucial for diagnosis and treatment.
Observation:
- A 16-year-old female presented with severe intellectual disability, congenital hydrocephalus, cleft lip and palate, talipes equinovarus, epilepsy, kyphoscoliosis, convergent strabismus, short stature, dystrophy, and facial dysmorphism.
- Array analysis identified a 3.7 Mb interstitial deletion within the 9q34.11-q34.13 region.
Findings:
- The identified deletion encompasses over 60 genes, including SPTAN1, DYT1/TOR1A, ABL1, ASS1, LAMC3, POMT1, DOLK, and GLE1, known to be associated with monogenic disorders.
- This represents the first reported patient with a deletion of this specific size and location in 9q34.11-q34.13.
Implications:
- This case underscores the phenotypic variability associated with chromosomal aberrations.
- Further studies involving additional patients with 9q34.11-q34.13 deletions are necessary to establish robust genotype-phenotype correlations.
- Investigating the contribution of individual genes within this deleted region will enhance our understanding of its role in congenital anomalies and neurodevelopmental disorders.
Abstract:
Interstitial deletions of chromosome bands 9q34.11-q34.13 are rare. We report on a 16-year-old female patient with severe intellectual disability, congenital hydrocephalus, cleft lip and palate, talipes equinovarus, epilepsy, kyphoscoliosis, convergent strabismus, severe short stature, dystrophy, and facial dysmorphic signs. Array analysis revealed a 3.7 Mb interstitial deletion in 9q34.11-q34.13. The deletion harbors more than 60 genes, including SPTAN1, DYT1/TOR1A, ABL1, ASS1, LAMC3, POMT1, DOLK, and GLE1, mutations in which have previously been associated with monogenic disorders. This is the first patient with a deletion of this size and position in 9q34.11-q34.13. Reports of additional patients with aberrations in this region will be needed to establish karyotype-phenotype correlations and to gain information on the contribution of individual genes for the clinical manifestations.
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