Related Experiment Video
Updated: May 21, 2026

11:26
Sequencing of mRNA from Whole Blood using Nanopore Sequencing
Published on: June 3, 2019
Nanopores: A journey towards DNA sequencing
1Department of Physics, Northeastern University, Boston, MA, United States. wanunu@neu.edu
Physics of Life Reviews
|June 5, 2012
Summary
Single-molecule biophysics utilizes nanopore technology to study nucleic acids. This method analyzes ion current changes as molecules pass through a nanoscale pore, offering insights into DNA sequencing and molecular structures.
Area of Science:
- Single-molecule biophysics
- Nucleic acid research
- Nanotechnology applications
Background:
- Nucleic acids are fundamental to life's processes.
- Studying nucleic acids at the single-molecule level is a rapidly advancing scientific field.
- The mid-1990s saw the introduction of nanopore technology for such studies.
Purpose of the Study:
- To review past and current studies on nucleic acid biophysics using nanopore technology.
- To highlight the significance of nanopores in single-molecule biophysics.
- To stimulate discussion on the immediate and future prospects of nanopore applications in this field.
Main Methods:
- Utilizes a nanoscale pore spanning an impermeable membrane between two electrolyte chambers.
- Applies voltage across the membrane, creating an ion flow through the pore.
- Analyzes measurable changes in transmembrane ion current as nucleic acid molecules pass through the pore.
Main Results:
- Nanopore analysis provides a simple yet powerful method for studying biomolecules.
- The technique functions as a high-throughput ion microscope and single-molecule force apparatus.
- Nanopores show significant promise for DNA sequencing and have become indispensable in single-molecule biophysics.
Conclusions:
- Nanopore technology is a validated and essential tool in single-molecule biophysics.
- The method allows for the observation of structural features of nucleic acids.
- There is substantial academic, industrial, and national interest in nanopore applications, particularly for DNA sequencing.
Related Concept Videos
Next-generation Sequencing
The first human genome sequencing project cost $2.7 billion and was declared complete in 2003, after 15 years of international cooperation and collaboration between several research teams and funding agencies. Today, with the advent of next-generation sequencing technologies, the cost and time of sequencing a human genome have dropped over 100 fold.
Next-Generation Sequencing Methods
Although all next-generation methods use different technologies, they all share a set of standard features.
Next-Generation Sequencing Methods
Although all next-generation methods use different technologies, they all share a set of standard features.
Sanger Sequencing
DNA sequencing is a fundamental technique that is routinely used in the biological sciences. This method can be applied to a range of questions at different scales - from the sequencing of a cloned DNA fragment or the study of a mutation in a gene up to whole-genome sequencing. However, despite the widespread use of sequencing today, it was not until 1977 that Fredrick Sanger and his collaborators developed the chain-termination method to decode DNA sequences. It relies on the separation of a...
RNA-seq
RNA sequencing, or RNA-Seq, is a high-throughput sequencing technology used to study the transcriptome of a cell. Transcriptomics helps to interpret the functional elements of a genome and identify the molecular constituents of an organism. Additionally, it also helps in understanding the development of an organism and the occurrence of diseases.
Before the discovery of RNA-seq, microarray-based methods and Sanger sequencing were used for transcriptome analysis. However, while microarray-based...
Before the discovery of RNA-seq, microarray-based methods and Sanger sequencing were used for transcriptome analysis. However, while microarray-based...
Maxam-Gilbert Sequencing
In the same year as the discovery of the Sanger sequencing method, another group of scientists, Allan Maxam and Walter Gilbert, demonstrated their chemical-cleavage method for DNA sequencing. The Maxam-Gilbert method relies on using different chemicals that can cleave the DNA sequence at specific sites, the separation of resulting DNA fragments of variable size using electrophoresis, and deciphering the DNA sequence from the resulting gel bands.
Challenges of the Maxam-Gilbert Method
The...
Challenges of the Maxam-Gilbert Method
The...
Genomics
Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...

