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Learning stable, regularised latent models of neural population dynamics.
Lars Buesing1, Jakob H Macke, Maneesh Sahani
1Gatsby Computational Neuroscience Unit, University College London, 17 Queen Square, London, WC1N 3AR, UK. lars@gatsby.ucl.ac.uk
Summary
We developed a new method for analyzing neural population activity using linear dynamical systems (LDS) models. This approach ensures stable dynamics and accurately captures temporal patterns, even with limited data, improving brain-machine interface models.
Area of Science:
- Computational Neuroscience
- Systems Neuroscience
- Machine Learning for Neuroscience
Background:
- Simultaneous recordings of large neuronal populations are becoming common, necessitating advanced statistical models.
- Latent population models like linear dynamical systems (LDS) effectively capture neural data structure but face challenges with stability and temporal continuity.
- Existing LDS models often produce biologically implausible unstable dynamics when trained on realistic datasets, hindering applications like brain-machine interfaces (BMI).
Purpose of the Study:
- To propose a novel expectation-maximization-based method for learning stable LDS models from neural population recordings.
- To ensure learned LDS models reflect true temporal continuity and avoid unstable dynamics.
- To improve the statistical description and stability of LDS models, particularly when limited training data is available.
Main Methods:
- Developed an expectation-maximization (EM) algorithm for fitting LDS models.
- Incorporated parameter constraints to guarantee system stability.
- Utilized regularization techniques to promote the capture of temporal structure in the neural data.
Main Results:
- The proposed method yields LDS parameter estimates that guarantee stable dynamics.
- When trained on limited data, the method provides a substantially better statistical description of neural activity compared to alternatives.
- Demonstrated effectiveness using both synthetic datasets and real multi-electrode recordings from the motor cortex.
Conclusions:
- The novel EM-based method effectively learns stable and temporally accurate LDS models for neural population activity.
- This approach overcomes limitations of traditional LDS models, offering improved performance with limited data.
- The developed technique is a valuable tool for analyzing complex neural dynamics and advancing brain-machine interface algorithms.
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