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Expression of proto-oncogene KIT is up-regulated in subset of human meningiomas
Masum Saini1, Ajaya Nand Jha, Andleeb Abrari
1Molecular Genetics Laboratory, National Institute of Immunology, Aruna Asaf Ali Marg, New Delhi 110067, India.
Background:
KIT is a proto-oncogene involved in diverse neoplastic processes. Aberrant kinase activity of the KIT receptor has been targeted by tyrosine kinase inhibitor (TKI) therapy in different neoplasias. In all the earlier studies, KIT expression was reported to be absent in meningiomas. However, we observed KIT mRNA expression in some meningioma cases. This prompted us to undertake its detailed analyses in meningioma tissues resected during 2008-2009.
Methods:
Tumor tissues and matched peripheral blood samples collected from meningioma patients were used for detailed molecular analyses. KIT expression was ascertained immunohistochemically and validated by immunoblotting. KIT and KITLG transcript levels were discerned by reverse transcription quantitative real-time PCR (RT-qPCR). Similarly, KIT amplification and allele loss were assessed by quantitative real-time (qPCR) and validated by fluorescence in situ hybridization (FISH) on the neoplastic tissues. Possible alterations of the gene at the nucleotide level were analyzed by sequencing.
Results:
Contrary to earlier reports, KIT expression, was detected immunohistochemically in 20.6% meningioma cases (n = 34). Receptor (KIT) and ligand (KITLG) transcripts monitored by RT-qPCR were found to co-express (p = 0.048) in most of the KIT immunopositive tumors. 1/7 KIT positive meningiomas showed allele loss corroborated by reduced FISH signal in the corresponding neoplastic tissue. Sequence analysis of KIT showed M541L substitution in exon 10, in one of the immunopositive cases. However, its biological consequence remains to be uncovered.
Conclusions:
This study clearly demonstrates KIT over-expression in the human meningiomas. The data suggest that up-regulated KIT transcription (p < 0.001), instead of gene amplification (p > 0.05), is a likely mechanism responsible for altered KIT expression. Thus, KIT is a potential candidate for detailed investigation in the context of meningioma pathogenesis.
Insights
KIT proto-oncogene is over-expressed in human meningiomas, challenging previous findings. Up-regulated KIT transcription, not gene amplification, appears to be the primary mechanism, suggesting KIT as a therapeutic target.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- KIT is a proto-oncogene implicated in various cancers.
- Aberrant KIT kinase activity is a target for tyrosine kinase inhibitor (TKI) therapy.
- Previous studies reported absent KIT expression in meningiomas, contrary to our observations.
Purpose of the Study:
- To investigate KIT expression and its potential role in meningioma pathogenesis.
- To analyze KIT mRNA and protein levels in meningioma tissues.
- To explore genetic alterations, including amplification and mutations, within the KIT gene in meningiomas.
Main Methods:
- Immunohistochemistry and immunoblotting for KIT protein detection.
- Reverse transcription quantitative real-time PCR (RT-qPCR) for KIT and KITLG transcript analysis.
- Quantitative PCR (qPCR) and fluorescence in situ hybridization (FISH) for gene copy number assessment.
- DNA sequencing for identifying KIT gene mutations.
Main Results:
- KIT expression was detected in 20.6% of meningioma cases, contradicting prior reports.
- KIT and KIT ligand (KITLG) transcripts co-expressed in most KIT-positive tumors (p=0.048).
- One case showed KIT allele loss, and another exhibited an M541L substitution in KIT exon 10.
Conclusions:
- This study demonstrates KIT over-expression in human meningiomas.
- Up-regulated KIT transcription, rather than gene amplification, is the likely cause of altered KIT expression (p<0.001).
- KIT represents a potential therapeutic target for meningioma treatment and warrants further investigation.
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