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Defining Hsp33's Redox-regulated Chaperone Activity and Mapping Conformational Changes on Hsp33 Using Hydrogen-deuterium Exchange Mass Spectrometry
Published on: June 7, 2018
Chaperones, but not oxidized proteins, are ubiquitinated after oxidative stress
Marc Kästle1, Sandra Reeg, Adelina Rogowska-Wrzesinska
1Department of Nutritional Toxicology, Institute of Nutrition, Friedrich-Schiller University Jena, 07743 Jena, Germany.
Abstract:
After oxidative stress, proteins that are oxidatively modified are degraded by the 20S proteasome. However, several studies have documented an enhanced ubiquitination of yet unknown proteins. Because ubiquitination is a prerequisite for degradation by the 26S proteasome in an ATP-dependent manner this raises the question whether these proteins are also oxidized and, if not, what proteins need to be ubiquitinated and degraded after oxidative conditions. By determination of oxidized and ubiquitinated proteins we demonstrate here that most oxidized proteins are not preferentially ubiquitinated. However, we were able to confirm an increase in ubiquitinated proteins 16 h after oxidative stress. Therefore, we isolated ubiquitinated proteins from hydrogen peroxide-treated cells, as well as from control cells and cells treated with lactacystin, an irreversible proteasome inhibitor, and identified some of these proteins by MALDI tandem mass spectrometry. As a result we obtained 24 different proteins that can be categorized into the following groups: chaperones, energy metabolism, cytoskeleton/intermediate filaments, and protein translation/ribosome biogenesis. The special set of identified, ubiquitinated proteins confirms the thesis that ubiquitination upon oxidative stress is not a random process to degrade the mass of oxidized proteins, but concerns a special group of functional proteins.
Insights
Oxidative stress triggers protein ubiquitination, but not all oxidized proteins are ubiquitinated. This study identifies specific functional proteins, like chaperones and metabolic enzymes, that are ubiquitinated after oxidative stress, indicating a targeted degradation process.
Area of Science:
- Cellular Biology
- Biochemistry
- Proteostasis
Background:
- Oxidative stress leads to protein damage.
- The 20S proteasome degrades oxidatively modified proteins.
- Enhanced ubiquitination of unknown proteins after oxidative stress is observed, suggesting a role for the 26S proteasome.
Purpose of the Study:
- To investigate the relationship between protein oxidation and ubiquitination after oxidative stress.
- To identify specific proteins that become ubiquitinated following oxidative conditions.
- To determine if ubiquitination targets oxidized proteins or a distinct set of functional proteins.
Main Methods:
- Quantification of oxidized and ubiquitinated proteins.
- Treatment of cells with hydrogen peroxide and lactacystin (proteasome inhibitor).
- Isolation and identification of ubiquitinated proteins using MALDI tandem mass spectrometry.
Main Results:
- Most oxidized proteins are not preferentially ubiquitinated.
- A significant increase in ubiquitinated proteins was confirmed 16 hours after oxidative stress.
- 24 distinct ubiquitinated proteins were identified, falling into categories such as chaperones, energy metabolism, cytoskeleton, and protein translation.
Conclusions:
- Ubiquitination following oxidative stress is not a random process for degrading bulk oxidized proteins.
- A specific subset of functional proteins, including chaperones and metabolic enzymes, are targeted for ubiquitination and subsequent degradation.
- This targeted ubiquitination plays a crucial role in cellular response and recovery from oxidative damage.
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