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The transcription factor TFEB links mTORC1 signaling to transcriptional control of lysosome homeostasis
Agnes Roczniak-Ferguson1, Constance S Petit, Florian Froehlich
1Department of Cell Biology, Yale University School of Medicine, New Haven, CT 06510, USA.
Abstract:
Lysosomes are the major cellular site for clearance of defective organelles and digestion of internalized material. Demand on lysosomal capacity can vary greatly, and lysosomal function must be adjusted to maintain cellular homeostasis. Here, we identified an interaction between the lysosome-localized mechanistic target of rapamycin complex 1 (mTORC1) and the transcription factor TFEB (transcription factor EB), which promotes lysosome biogenesis. When lysosomal activity was adequate, mTOR-dependent phosphorylation of TFEB on Ser(211) triggered the binding of 14-3-3 proteins to TFEB, resulting in retention of the transcription factor in the cytoplasm. Inhibition of lysosomal function reduced the mTOR-dependent phosphorylation of TFEB, resulting in diminished interactions between TFEB and 14-3-3 proteins and the translocation of TFEB into the nucleus, where it could stimulate genes involved in lysosomal biogenesis. These results identify TFEB as a target of mTOR and suggest a mechanism for matching the transcriptional regulation of genes encoding proteins of autophagosomes and lysosomes to cellular need. The closely related transcription factors MITF (microphthalmia transcription factor) and TFE3 (transcription factor E3) also localized to lysosomes and accumulated in the nucleus when lysosome function was inhibited, thus broadening the range of physiological contexts under which this regulatory mechanism may prove important.
Insights
Cellular lysosomes adjust function via mTORC1 and transcription factor TFEB. Adequate lysosomal activity retains TFEB in cytoplasm; inhibited function moves TFEB to the nucleus, promoting lysosome biogenesis.
Area of Science:
- Cell Biology
- Molecular Biology
- Biochemistry
Background:
- Lysosomes are critical for cellular waste removal and homeostasis.
- Lysosomal capacity must dynamically adapt to cellular demands.
- Regulation of lysosomal function is essential for maintaining cellular health.
Purpose of the Study:
- To investigate the interaction between mTORC1 and TFEB in lysosomal regulation.
- To elucidate the mechanism controlling TFEB localization and activity.
- To understand how cellular need influences lysosome biogenesis.
Main Methods:
- Identified protein-protein interactions using co-immunoprecipitation.
- Assessed protein phosphorylation status via Western blotting.
- Tracked transcription factor translocation using immunofluorescence microscopy.
Main Results:
- Lysosome-localized mTORC1 phosphorylates TFEB, promoting 14-3-3 binding and cytoplasmic retention.
- Inhibition of lysosomal function reduces TFEB phosphorylation, releasing it from 14-3-3 binding.
- Reduced TFEB-14-3-3 interaction facilitates TFEB nuclear translocation, activating lysosomal biogenesis genes.
Conclusions:
- TFEB is a direct target of mTORC1 signaling in response to lysosomal activity.
- This mechanism links lysosomal function to the transcriptional control of lysosome biogenesis.
- Related factors MITF and TFE3 may utilize similar regulatory pathways.
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