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Related Concept Videos

lncRNA - Long Non-coding RNAs02:39

lncRNA - Long Non-coding RNAs

In humans, more than 80% of the genome gets transcribed. However, only around 2% of the genome codes for proteins. The remaining part produces non-coding RNAs which includes ribosomal RNAs, transfer RNAs, telomerase RNAs, and regulatory RNAs, among other types. A large number of regulatory non-coding RNAs have been classified into two groups depending upon their length – small non-coding RNAs, such as microRNA, which are less than 200 nucleotides in length, and long non-coding RNA (lncRNA)...
lncRNA - Long Non-coding RNAs02:39

lncRNA - Long Non-coding RNAs

In humans, more than 80% of the genome gets transcribed. However, only around 2% of the genome codes for proteins. The remaining part produces non-coding RNAs which includes ribosomal RNAs, transfer RNAs, telomerase RNAs, and regulatory RNAs, among other types. A large number of regulatory non-coding RNAs have been classified into two groups depending upon their length – small non-coding RNAs, such as microRNA, which are less than 200 nucleotides in length, and long non-coding RNA (lncRNA)...
Ribosomal RNA Synthesis02:53

Ribosomal RNA Synthesis

Ribosome synthesis is a highly complex and coordinated process involving more than 200 assembly factors. The synthesis and processing of ribosomal components occurs not only in the nucleolus but also in the nucleoplasm and the cytoplasm of eukaryotic cells.
Ribosome biogenesis begins with the synthesis of 5S and 45S pre-rRNAs by distinct RNA polymerases. The primary transcripts are extensively processed and modified before they are bound and folded by ribosomal proteins and assembly factors,...
Types of RNA01:20

Types of RNA

Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in regulating gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA Performs Diverse...

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Enhanced Northern Blot Detection of Small RNA Species in Drosophila Melanogaster
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Published on: August 21, 2014

Long noncoding RNAs in C. elegans.

Jin-Wu Nam1, David P Bartel

  • 1Whitehead Institute for Biomedical Research, Cambridge, Massachusetts 02142, USA.

Genome Research
|June 19, 2012
PubMed
Summary
This summary is machine-generated.

Researchers identified 170 long intervening noncoding RNAs (lincRNAs) and 60 antisense noncoding RNAs (ancRNAs) in Caenorhabditis elegans. These noncoding RNAs exhibit stage-dependent expression and diverse functions, offering insights into invertebrate genomics.

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Published on: September 25, 2013

Area of Science:

  • Genomics
  • Noncoding RNA Biology
  • Invertebrate Zoology

Background:

  • Thousands of long noncoding RNAs (lncRNAs) are known in vertebrates, but their roles in invertebrates are less understood.
  • lncRNAs play crucial roles in various biological processes, including gene regulation and development.

Purpose of the Study:

  • To identify and characterize long noncoding RNAs (lncRNAs) in the invertebrate Caenorhabditis elegans.
  • To investigate the genomic features, expression patterns, and potential functions of lncRNAs in a nonvertebrate model organism.

Main Methods:

  • Utilized RNA-sequencing, poly(A)-site, and ribosome-mapping data for lncRNA identification.
  • Classified lncRNAs into long intervening ncRNAs (lincRNAs) and antisense ncRNAs (ancRNAs).
  • Analyzed sequence conservation, expression profiles, and association with small RNAs and protein-coding transcripts.

Main Results:

  • Identified 170 lincRNAs and approximately 60 ancRNAs in C. elegans.
  • lncRNA genes exhibited stage-dependent expression patterns, differing from protein-coding genes.
  • A subset of lincRNAs showed low sequence conservation and mapped antisense to endogenous siRNA clusters, suggesting a role in siRNA biogenesis.
  • The majority of lincRNAs were more conserved and associated with key developmental processes like dauer formation, male identity, and sperm development.

Conclusions:

  • This study provides a comprehensive catalog of lncRNAs in C. elegans, expanding our understanding of noncoding RNA genomics in invertebrates.
  • The identified lncRNAs represent a valuable resource for future functional studies, particularly those related to development and gene regulation in nonvertebrate systems.