Related Experiment Video
Updated: May 13, 2026

Surgical Injury to the Mouse Pancreas through Ligation of the Pancreatic Duct as a Model for Endocrine and Exocrine Reprogramming and Proliferation
Published on: August 7, 2015
Sox9b is a key regulator of pancreaticobiliary ductal system development
Marion Delous1, Chunyue Yin, Donghun Shin
1Department of Biochemistry, Program in Developmental and Stem Cell Biology, Liver Center and Diabetes Center, University of California San Francisco, San Francisco, California, United States of America. marion.delous@ucsf.edu
Insights
SOX9 is crucial for developing the pancreaticobiliary ductal system. Zebrafish studies reveal SOX9B mutations cause severe duct malformations and cholestasis, highlighting SOX9
Area of Science:
- Developmental biology
- Zebrafish models
- Molecular genetics
Background:
- The pancreaticobiliary ductal system's development is poorly understood.
- SOX9 is expressed in this system, but mouse models have limitations for functional studies.
- Zebrafish offer a viable model for SOX9 function in duct development.
Purpose of the Study:
- To investigate the role of SOX9 in pancreaticobiliary ductal system morphogenesis using zebrafish.
- To analyze the consequences of SOX9B loss-of-function on duct development and identify potential signaling interactions.
Main Methods:
- Utilized a zebrafish nonsense allele of sox9b (sox9b(fh313)) for loss-of-function analysis.
- Examined embryonic and larval stages for ductal system morphology and cell differentiation.
- Investigated the interaction between Sox9b and Notch signaling pathways.
Main Results:
- sox9b(fh313) mutants exhibit severe pancreaticobiliary duct malformations, including cholestasis, ductal proliferation, cysts, and fibrosis.
- Hepatopancreatic ductal cells mis-differentiate, and intrahepatic and intrapancreatic duct formation is impaired.
- Sox9b functions with Notch signaling to regulate intrahepatic biliary network formation.
Conclusions:
- SOX9 plays a critical role in the morphogenesis of the pancreaticobiliary ductal system.
- SOX9B is essential for proper ductal cell differentiation and network assembly.
- Human SOX9 is a candidate gene for pancreaticobiliary duct malformation disorders.
Abstract:
The pancreaticobiliary ductal system connects the liver and pancreas to the intestine. It is composed of the hepatopancreatic ductal (HPD) system as well as the intrahepatic biliary ducts and the intrapancreatic ducts. Despite its physiological importance, the development of the pancreaticobiliary ductal system remains poorly understood. The SRY-related transcription factor SOX9 is expressed in the mammalian pancreaticobiliary ductal system, but the perinatal lethality of Sox9 heterozygous mice makes loss-of-function analyses challenging. We turned to the zebrafish to assess the role of SOX9 in pancreaticobiliary ductal system development. We first show that zebrafish sox9b recapitulates the expression pattern of mouse Sox9 in the pancreaticobiliary ductal system and use a nonsense allele of sox9b, sox9b(fh313), to dissect its function in the morphogenesis of this structure. Strikingly, sox9b(fh313) homozygous mutants survive to adulthood and exhibit cholestasis associated with hepatic and pancreatic duct proliferation, cyst formation, and fibrosis. Analysis of sox9b(fh313) mutant embryos and larvae reveals that the HPD cells appear to mis-differentiate towards hepatic and/or pancreatic fates, resulting in a dysmorphic structure. The intrahepatic biliary cells are specified but fail to assemble into a functional network. Similarly, intrapancreatic duct formation is severely impaired in sox9b(fh313) mutants, while the embryonic endocrine and acinar compartments appear unaffected. The defects in the intrahepatic and intrapancreatic ducts of sox9b(fh313) mutants worsen during larval and juvenile stages, prompting the adult phenotype. We further show that Sox9b interacts with Notch signaling to regulate intrahepatic biliary network formation: sox9b expression is positively regulated by Notch signaling, while Sox9b function is required to maintain Notch signaling in the intrahepatic biliary cells. Together, these data reveal key roles for SOX9 in the morphogenesis of the pancreaticobiliary ductal system, and they cast human Sox9 as a candidate gene for pancreaticobiliary duct malformation-related pathologies.
Related Concept Videos
Pleiotropy
Regulation of Expression Occurs at Multiple Steps
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Master Transcription Regulators
Exon Recombination
Exon shuffling follows “splice frame rules.” Each exon has three reading...
Regulation of Expression at Multiple Steps
Role Of Notch Signalling In Intestinal Stem Cell Renewal
Direct cell-to-cell contact is needed for the activation of Notch signaling. The signal is initiated when a notch ligand binds to a receptor on an adjacent cell, also...

