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Updated: May 20, 2026

Following the Dynamics of Structural Variants in Experimentally Evolved Populations
Published on: February 3, 2023
Contrasting dynamics of a mutator allele in asexual populations of differing size
Yevgeniy Raynes1, Matthew R Gazzara, Paul D Sniegowski
1Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6018, USA. yraynes@sas.upenn.edu
Abstract:
Mutators have been shown to hitchhike in asexual populations when the anticipated beneficial mutation supply rate of the mutator subpopulation, NU(b) (for subpopulation of size N and beneficial mutation rate U(b)) exceeds that of the wild-type subpopulation. Here, we examine the effect of total population size on mutator dynamics in asexual experimental populations of Saccharomyces cerevisiae. Although mutators quickly hitchhike to fixation in smaller populations, mutator fixation requires more and more time as population size increases; this observed delay in mutator hitchhiking is consistent with the expected effect of clonal interference. Interestingly, despite their higher beneficial mutation supply rate, mutators are supplanted by the wild type in very large populations. We postulate that this striking reversal in mutator dynamics is caused by an interaction between clonal interference, the fitness cost of the mutator allele, and infrequent large-effect beneficial mutations in our experimental populations. Our work thus identifies a potential set of circumstances under which mutator hitchhiking can be inhibited in natural asexual populations, despite recent theoretical predictions that such populations should have a net tendency to evolve ever-higher genomic mutation rates.
Insights
Mutator hitchhiking, where increased mutation rates benefit asexual populations, is inhibited in very large populations. This occurs due to clonal interference and the mutator allele
Area of Science:
- Evolutionary Biology
- Microbial Genetics
Background:
- Mutator strains, characterized by elevated mutation rates, can increase the supply of beneficial mutations in asexual populations.
- The hitchhiking of mutators is typically favored when their beneficial mutation supply rate exceeds that of wild-type strains.
Purpose of the Study:
- To investigate the impact of total population size on the dynamics of mutator strains in asexual populations of Saccharomyces cerevisiae.
- To understand the conditions under which mutator hitchhiking may be inhibited in natural populations.
Main Methods:
- Experimental evolution using Saccharomyces cerevisiae populations of varying sizes.
- Monitoring the frequency and fixation of mutator strains over time.
Main Results:
- Mutators hitchhiked to fixation rapidly in smaller populations.
- Fixation time for mutators increased with population size, consistent with clonal interference.
- In very large populations, mutators were outcompeted by wild-type strains, a reversal of expected dynamics.
Conclusions:
- Clonal interference, mutator fitness costs, and infrequent large-effect beneficial mutations interact to inhibit mutator hitchhiking in large populations.
- These findings identify specific conditions that can prevent the accumulation of higher genomic mutation rates in natural asexual populations, contrary to some theoretical predictions.
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