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Updated: May 20, 2026

Isolation and Genome Analysis of Single Virions using 'Single Virus Genomics'
Published on: May 26, 2013
Evolutionary dynamics of genome segmentation in multipartite viruses
Jaime Iranzo1, Susanna C Manrubia
1Centro de Astrobiología, INTA-CSIC, 28850 Torrejón de Ardoz, Madrid, Spain.
Abstract:
Multipartite viruses are formed by a variable number of genomic fragments packed in independent viral capsids. This fact poses stringent conditions on their transmission mode, demanding, in particular, a high multiplicity of infection (MOI) for successful propagation. The actual advantages of the multipartite viral strategy are as yet unclear. The origin of multipartite viruses represents an evolutionary puzzle. While classical theories suggested that a faster replication rate or higher replication fidelity would favour shorter segments, recent experimental results seem to point to an increased stability of virions with incomplete genomes as a factor able to compensate for the disadvantage of mandatory complementation. Using as main parameters differential stability as a function of genome length and MOI, we calculate the conditions under which a set of complementary segments of a viral genome would outcompete the non-segmented variant. Further, we examine the likeliness that multipartite viral forms could be the evolutionary outcome of the competition among the defective genomes of different lengths that spontaneously arise under replication of a complete, wild-type genome. We conclude that only multipartite viruses with a small number of segments could be produced in our scenario, and discuss alternative hypotheses for the origin of multipartite viruses with more than four segments.
Insights
Multipartite viruses, with genomes split into multiple parts, require high infection numbers to spread. This study suggests genome stability, not replication speed, favors their evolution, particularly for viruses with few segments.
Area of Science:
- Virology
- Evolutionary Biology
- Genetics
Background:
- Multipartite viruses package their genomes into multiple independent capsids.
- Successful propagation necessitates a high multiplicity of infection (MOI).
- The evolutionary advantages and origins of multipartite viruses remain largely unclear.
Purpose of the Study:
- To determine the conditions favoring multipartite viral genome organization over non-segmented variants.
- To explore the evolutionary pathways leading to multipartite viruses from defective genome fragments.
- To investigate the role of differential stability and MOI in multipartite virus evolution.
Main Methods:
- Mathematical modeling of viral genome stability as a function of genome length.
- Calculation of conditions for competitive advantage of segmented genomes.
- Analysis of evolutionary scenarios involving defective viral genomes.
Main Results:
- Increased virion stability of incomplete genomes can compensate for the need for complementation.
- Differential stability and MOI are key parameters in the evolution of multipartite viruses.
- The model predicts that multipartite viruses with a small number of segments are more likely to evolve under the studied conditions.
Conclusions:
- Viral genome segmentation may be driven by enhanced virion stability rather than replication efficiency.
- The evolutionary origin of multipartite viruses, especially those with numerous segments, requires further investigation beyond the proposed model.
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