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Related Concept Videos

Assembly of the Lipid Bilayer in the ER01:28

Assembly of the Lipid Bilayer in the ER

Biological membranes are more than just a barrier separating cell cytoplasm from the outside environment. They are highly dynamic and help maintain the integrity and physiological stability of the cells as well as membrane-bound organelles. Membranes also play vital roles in cell-to-cell and intracellular communication.
A large chunk of any biological membrane is composed of phospholipids. These lipids have a heterogeneous distribution across different subcellular organelles and even between...
Tail-anchoring of Proteins in the ER Membrane01:45

Tail-anchoring of Proteins in the ER Membrane

Tail-anchored, or TA, proteins are estimated to make up to 3-5% of membrane proteins found in the eukaryotic cell. Such proteins have a single transmembrane domain located approximately 30 amino acid residues upstream from the C-terminal end. As a result, the signal recognition particle (SRP) cannot guide a TA protein to the ER membrane for cotranslational insertion. Hence, they are integrated into the ER membrane post-translationally using their C-terminal end as the anchor. TA proteins...
Rab Cascades01:25

Rab Cascades

Rab GTPases act in a regulated cascade during membrane fusion, helping the lipid bilayers mix. The Rab family of proteins are active when bound to GTP, and inactive when bound to GDP. Hence, they act as guanine nucleotide-dependent molecular switches. Rab-GTP recognizes and binds to long or short-range tethering proteins to capture the target vesicle. These tethers coordinate with SNAREs on the vesicle and the target membrane to assemble the trans SNARE complex that locks the mixing bilayers.
Clathrin Coated Vesicles01:12

Clathrin Coated Vesicles

Clathrin-coated vesicles use endocytosis to transport receptors and lysosomal hydrolases from the Golgi to the lysosome in the late secretory pathway. Clathrin-mediated endocytosis was the first described endocytic process, and Clathrin-coated vesicles remain one of the most well-studied transport vesicles. The molecular machinery that generates clathrin-coated vesicles comprises over 50 proteins that precisely coordinate vesicle formation. Cell surface receptors concentrated in indented sites...
Insertion of Multi-pass Transmembrane Proteins in the RER01:29

Insertion of Multi-pass Transmembrane Proteins in the RER

The rough ER membrane synthesizes, assembles, and embeds transmembrane proteins in diverse topologies. These proteins function as transporters or channels and can remain in the ER membrane or are sent to the Golgi complex, lysosome, and cell membrane.
The multipass transmembrane proteins are the type IV integral membrane proteins with multiple topogenic sequences determining their spatial arrangement in the ER membrane. Nearly all multipass proteins lack a cleavable signal sequence and use...
Protein Complex Assembly02:41

Protein Complex Assembly

Proteins can form homomeric complexes with another unit of the same protein or heteromeric complexes with different types.  Most protein complexes self-assemble spontaneously via ordered pathways, while some proteins need assembly factors that guide their proper assembly. Despite the crowded intracellular environment, proteins usually interact with their correct partners and form functional complexes.
Many viruses self-assemble into a fully functional unit using the infected host cell to...

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Native Cell Membrane Nanoparticles System for Membrane Protein-Protein Interaction Analysis
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Assembling of AcrB trimer in cell membrane.

Wei Lu1, Qian Chai, Meng Zhong

  • 1Department of Chemistry, University of Kentucky, Lexington, KY 40506, USA.

Journal of Molecular Biology
|July 7, 2012
PubMed
Summary

Oligomeric membrane proteins like AcrB assemble in Escherichia coli. This study reveals their assembly deviates from random chance, suggesting co-translational clustering influences oligomerization.

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Area of Science:

  • Molecular Biology
  • Biochemistry
  • Cell Biology

Background:

  • Many essential membrane proteins function as oligomers.
  • The precise mechanisms of how these protein subunits assemble within the cell membrane are not fully understood.
  • AcrB, an essential transporter, is known to form an obligate homo-trimer, with folding preceding oligomerization.

Purpose of the Study:

  • To investigate the assembly mechanism of the AcrB homo-trimer in the Escherichia coli cell membrane.
  • To determine if AcrB trimerization follows a random subunit association model or if other factors influence the process.
  • To explore potential explanations for non-random assembly patterns.

Main Methods:

  • Utilized four experimental approaches involving AcrB variants.
  • Employed fusion tags, disulfide trapping, and activity measurements to study subunit interactions.
  • Co-expressed AcrB variants in Escherichia coli to analyze in vivo assembly.

Main Results:

  • Demonstrated that co-expressed AcrB variants can form hybrid trimers within the same cell.
  • Observed that the extent of co-assembly did not align with predictions based on a random subunit association model.
  • Identified a deviation from random assembling, suggesting non-random factors are at play.

Conclusions:

  • AcrB homo-trimerization in vivo is not solely driven by random subunit encounters.
  • The polysome structure during translation may play a role in clustering subunits, influencing their assembly.
  • These findings offer novel insights into the dynamic assembly and equilibration of obligate homo-oligomeric membrane proteins.