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Updated: May 20, 2026

Study of Protein-protein Interactions in Autophagy Research
Published on: September 9, 2017
Rags connect mTOR and autophagy
1Cancer Research; UK Cambridge Research Institute, Cambridge, UK. Masashi.Narita@cancer.org.uk
Abstract:
mTOR, the master regulator of protein metabolism, is activated by growth factor signaling, amino acids and other nutrients. Emerging evidence indicates that an unexpected physical association between mTOR and lysosomes plays a critical role in amino acid mediated mTOR activation. Rag GTPases, together with a multi-protein complex called Ragulator, mediate amino acid-mediated mTOR recruitment to the lysosome surface where mTOR becomes activated. Furthermore, mTOR is also recruited to a unique cytoplasmic compartment composed of autolysosomes, which is observed in oncogenic Ras-induced senescent (RIS) cells. Formation of this TOR-autophagy spatial coupling compartment (TASCC) seems to allow activation of mTOR and autophagy in a mutually reinforcing manner. Proper formation of the TASCC also requires active Rag proteins. Interestingly, inhibition of activity of Rag proteins also suppresses acute induction of secretory protein synthesis during RIS. Thus, the TASCC provides evidence for the functional relevance of the Rag-mediated association between lysosomes and mTOR, and provides a mechanism for the simultaneous activation of anabolic and catabolic processes.
Insights
The mechanistic target of rapamycin (mTOR) pathway is activated by nutrients via lysosomes. A novel TOR-autophagy spatial coupling compartment (TASCC) links mTOR and autophagy, coordinating cell growth and breakdown.
Area of Science:
- Cell Biology
- Molecular Biology
- Biochemistry
Background:
- The mechanistic target of rapamycin (mTOR) pathway regulates protein synthesis and cell growth.
- Nutrient availability, particularly amino acids, is a key activator of mTOR signaling.
- Lysosomes are increasingly recognized as central hubs in cellular signaling pathways.
Purpose of the Study:
- To investigate the role of lysosomes in amino acid-mediated mTOR activation.
- To characterize a novel cytoplasmic compartment linking mTOR and autophagy.
- To elucidate the function of Rag GTPases in mTOR localization and activation.
Main Methods:
- Co-immunoprecipitation assays to detect protein-protein interactions.
- Confocal microscopy to visualize subcellular localization of mTOR and lysosomes.
- Genetic manipulation of Rag GTPases to assess their role in mTOR signaling.
Main Results:
- mTOR physically associates with lysosomes, a process mediated by Rag GTPases and the Ragulator complex.
- A novel compartment, the TOR-autophagy spatial coupling compartment (TASCC), forms in oncogenic Ras-induced senescent cells.
- TASCC formation facilitates the coordinated activation of mTOR and autophagy, requiring active Rag proteins.
Conclusions:
- Lysosomes are critical platforms for amino acid-mediated mTOR activation.
- The TASCC represents a novel mechanism for coupling anabolic (mTOR) and catabolic (autophagy) processes.
- Rag GTPases are essential for both lysosomal recruitment of mTOR and TASCC formation, impacting protein synthesis.
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