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Coupled Assays for Monitoring Protein Refolding in Saccharomyces cerevisiae
Published on: July 9, 2013
Heat shock factor 1 is inactivated by amino acid deprivation
Sanne M M Hensen1, Lonneke Heldens, Chrissy M W van Enckevort
1Department of Biomolecular Chemistry, Radboud University Nijmegen, Nijmegen, The Netherlands.
Abstract:
Mammalian cells respond to a lack of amino acids by activating a transcriptional program with the transcription factor ATF4 as one of the main actors. When cells are faced with cytoplasmic proteotoxic stress, a quite different transcriptional response is mounted, the heat shock response, which is mediated by HSF1. Here, we show that amino acid deprivation results in the inactivation of HSF1. In amino acid deprived cells, active HSF1 loses its DNA binding activity as demonstrated by EMSA and ChIP. A sharp decrease in the transcript level of HSF1 target genes such as HSPA1A (Hsp70), DNAJB1 (Hsp40), and HSP90AA1 is also seen. HSPA1A mRNA, but not DNAJB1 mRNA, was also destabilized. In cells cultured with limiting leucine, HSF1 activity also declined. Lack of amino acids thus could lead to a lower chaperoning capacity and cellular frailty. We show that the nutrient sensing response unit of the ASNS gene contains an HSF1 binding site, but we could not detect binding of HSF1 to this site in vivo. Expression of either an HSF1 mutant lacking the activation domain (HSF379) or an HSF1 mutant unable to bind DNA (K80Q) had only a minor effect on the transcript levels of amino acid deprivation responsive genes.
Insights
Amino acid deprivation inactivates heat shock factor 1 (HSF1), reducing its DNA binding and decreasing target gene expression. This suggests nutrient stress may impair cellular chaperoning capacity, potentially leading to cellular frailty.
Area of Science:
- Cellular Biology
- Molecular Biology
- Stress Response
Background:
- Mammalian cells activate ATF4 during amino acid deficiency and HSF1 during proteotoxic stress.
- The interplay between nutrient sensing and heat shock response pathways is not fully understood.
Purpose of the Study:
- To investigate the effect of amino acid deprivation on heat shock factor 1 (HSF1) activity.
- To determine if HSF1 is involved in the cellular response to nutrient scarcity.
Main Methods:
- Electrophoretic mobility shift assay (EMSA) and chromatin immunoprecipitation (ChIP) to assess HSF1 DNA binding.
- Quantitative PCR (qPCR) to measure transcript levels of HSF1 target genes.
- mRNA stability assays.
Main Results:
- Amino acid deprivation leads to HSF1 inactivation and loss of DNA binding activity.
- Transcript levels of HSF1 target genes (HSPA1A, DNAJB1, HSP90AA1) significantly decrease.
- HSPA1A mRNA is destabilized, while DNAJB1 mRNA is not.
- HSF1 binding to the ASNS gene promoter was not detected in vivo.
Conclusions:
- Amino acid deprivation inactivates HSF1, potentially reducing cellular chaperoning capacity and increasing cellular frailty.
- HSF1 does not appear to play a major role in the transcriptional response to amino acid deprivation.
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