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Related Concept Videos

Translesion DNA Polymerases02:10

Translesion DNA Polymerases

Translesion (TLS) polymerases rescue stalled DNA polymerases at sites of damaged bases by replacing the replicative polymerase and installing a nucleotide across the damaged site. Doing so, TLS allows additional time for the cell to repair the damage before resuming regular DNA replication.
TLS polymerases are found in all three domains of life - archaea, bacteria, and eukaryotes. Of the different classes of TLS polymerases, members of the Y family are fitted with specialized structures that...
Fixing Double-strand Breaks02:04

Fixing Double-strand Breaks

The double-stranded structure of DNA has two major advantages. First, it serves as a safe repository of genetic information where one strand serves as the back-up in case the other strand is damaged. Second, the double-helical structure can be wrapped around proteins called histones to form nucleosomes, which can then be tightly wound to form chromosomes. This way, DNA chains up to 2 inches long can be contained within microscopic structures in a cell. A double-stranded break not only damages...
Overview of DNA Repair02:25

Overview of DNA Repair

In order to be passed through generations, genomic DNA must be undamaged and error-free. However, every day, DNA in a cell undergoes several thousand to a million damaging events by natural causes and external factors. Ionizing radiation such as UV rays, free radicals produced during cellular respiration, and hydrolytic damage from metabolic reactions can alter the structure of DNA. Damages caused include single-base alteration, base dimerization, chain breaks, and cross-linkage.
Chemically...
Proofreading01:31

Proofreading

Synthesis of new DNA molecules is carried out by the enzyme DNA polymerase, which adds nucleotides on the daughter strand complementary to the template DNA strand. DNA polymerase has a higher affinity to add the correct base and ensures fidelity during DNA replication. Furthermore,  it exhibits proofreading activity during replication, using an exonuclease domain that cuts off incorrect nucleotides from the nascent DNA strand.
Errors During Replication are Corrected by the DNA Polymerase Enzyme
Proofreading01:43

Proofreading

Overview
Nucleotide Excision Repair01:08

Nucleotide Excision Repair

Overview

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Related Experiment Video

Updated: May 20, 2026

Studying DNA Looping by Single-Molecule FRET
11:27

Studying DNA Looping by Single-Molecule FRET

Published on: June 28, 2014

Hole and excess electron transfer dynamics in DNA.

Mamoru Fujitsuka1, Tetsuro Majima

  • 1The Institute of Scientific and Industrial Research (SANKEN), Osaka University, Mihogaoka 8-1, Ibaraki, Osaka 567-0047, Japan.

Physical Chemistry Chemical Physics : PCCP
|July 19, 2012
PubMed
Summary

This study summarizes DNA charge transfer dynamics. While hole transfer is well-understood, excess electron transfer mechanisms in DNA require further investigation.

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Area of Science:

  • Biophysics
  • Nanotechnology
  • Physical Chemistry

Background:

  • Charge transfer in DNA is crucial for bioscience, nanotechnology, and physical chemistry.
  • Both positive charges (holes) and negative charges (excess electrons) facilitate charge transfer in DNA.
  • Hole transfer mechanisms in DNA have been extensively studied using spectroscopic methods.

Purpose of the Study:

  • To summarize current research on charge transfer dynamics in DNA.
  • To highlight the established understanding of hole transfer.
  • To identify the knowledge gaps in excess electron transfer dynamics in DNA.

Main Methods:

  • Review of time-resolved spectroscopic methods.
  • Analysis of product analysis in charge transfer studies.
  • Synthesis of findings from various research groups.

Main Results:

  • Detailed mechanisms and dynamics of hole transfer in DNA are well-characterized.
  • The precise dynamics of excess electron transfer in DNA remain less understood.
  • Ongoing research continues to reveal aspects of electron transfer in DNA.

Conclusions:

  • A comprehensive understanding of DNA charge transfer requires further elucidation of excess electron dynamics.
  • Future research should focus on establishing the detailed mechanisms of electron transfer in DNA.
  • Bridging the knowledge gap in electron transfer is essential for advancing DNA-based technologies.