Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Oxygenic Photosynthesis01:26

Oxygenic Photosynthesis

Oxygenic photosynthesis is a fundamental process in which light energy is harnessed to drive the oxidation of water, leading to the production of molecular oxygen (O₂), adenosine triphosphate (ATP), and nicotinamide adenine dinucleotide phosphate (NADPH). This process is essential for sustaining aerobic life on Earth and is primarily carried out by cyanobacteria, algae, and plants. The core of oxygenic photosynthesis lies in the thylakoid membranes, where chlorophyll pigments facilitate light...
Marine Microbial Ecology01:30

Marine Microbial Ecology

Marine microbial ecosystems are shaped by distinct physicochemical limits, including high salinity, low nutrient availability, and fluctuating oxygen levels. These conditions favor smaller microbial cell sizes, which maximize their surface-to-volume ratio for efficient nutrient uptake.Microbial activity and community composition are closely linked to biogeochemical cycles, particularly in dynamic environments like estuaries, where halotolerant microbes thrive in response to variable salinity...
Primary Production01:06

Primary Production

The total amount of energy acquired by primary producers in an ecosystem is called gross primary production (GPP). However, of this energy, producers use some for metabolic processes, and some is lost as heat, decreasing the amount of energy available to the next trophic level. The remaining usable amount of energy is called the net primary productivity (NPP). In terrestrial ecosystems, NPP is driven by climate, while light penetration and nutrient availability drive NPP in aquatic ecosystems.
Freshwater Microbial Ecology01:24

Freshwater Microbial Ecology

Freshwater systems such as streams, rivers, and lakes exhibit distinct physical and biological characteristics that influence their microbial communities. These environments are broadly categorized into lotic systems—those with flowing waters like streams and most rivers—and lentic systems, which include still or slow-moving waters such as lakes, ponds, and marshes.In lentic systems, phytoplankton drive primary production, generating autochthonous organic carbon. In contrast, lotic systems...
Deep Sea Microbial Ecology01:18

Deep Sea Microbial Ecology

The deep ocean and its underlying sediments represent vast, largely unexplored microbial habitats that extend far beyond the sunlit photic zone. The photic (euphotic) zone typically spans the upper ~100–200 meters of pelagic waters in the open ocean, but its depth varies geographically and seasonally, where sufficient light supports photosynthetic life. Below this lies the deep sea, spanning roughly 1000–6000 meters (bathypelagic to abyssal zones), with deeper hadal trenches extending beyond...
Microbial Nutrition01:28

Microbial Nutrition

Organisms exhibit remarkable metabolic diversity, categorized based on how they acquire energy and carbon. These strategies enable survival in various ecological niches and are essential for maintaining energy flow and nutrient cycling within ecosystems.Energy and Carbon SourcesOrganisms are classified as phototrophs or chemotrophs based on energy acquisition. Phototrophs use light as their energy source, while chemotrophs rely on oxidizing chemical compounds. Further differentiation arises...

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Genomic-to-space measurements reveal large-scale ocean nutrient stress.

Science advances·2026
Same author

Global declines in net primary production in the ocean color era.

Nature communications·2025
Same author

Scientists' call to action: Microbes, planetary health, and the Sustainable Development Goals.

Cell·2024
Same author

Neutral Theory and Plankton Biodiversity.

Annual review of marine science·2023
Same author

Phytoplankton biodiversity and the inverted paradox.

ISME communications·2023
Same author

Phytoplankton community structuring and succession in a competition-neutral resource landscape.

ISME communications·2023

Related Experiment Video

Updated: May 20, 2026

Establishment of Microbial Eukaryotic Enrichment Cultures from a Chemically Stratified Antarctic Lake and Assessment of Carbon Fixation Potential
14:38

Establishment of Microbial Eukaryotic Enrichment Cultures from a Chemically Stratified Antarctic Lake and Assessment of Carbon Fixation Potential

Published on: April 20, 2012

The oligotrophic ocean is autotrophic.

Peter J le B Williams1, Paul D Quay, Toby K Westberry

  • 1School of Ocean Sciences, Bangor University, Menai Bridge, Anglesey, UK. pjlw@bangor.ac.uk

Annual Review of Marine Science
|July 20, 2012
PubMed
Summary

Oceanographic studies show conflicting results on whether subtropical gyres are net heterotrophic or autotrophic. This research suggests in vitro methods overestimate respiration or underestimate photosynthesis, indicating net autotrophy.

More Related Videos

Unraveling the Unseen Players in the Ocean - A Field Guide to Water Chemistry and Marine Microbiology
10:43

Unraveling the Unseen Players in the Ocean - A Field Guide to Water Chemistry and Marine Microbiology

Published on: November 5, 2014

Streamlined Sampling and Cultivation of the Pelagic Cosmopolitan Larvacean, Oikopleura dioica
11:55

Streamlined Sampling and Cultivation of the Pelagic Cosmopolitan Larvacean, Oikopleura dioica

Published on: June 16, 2020

Related Experiment Videos

Last Updated: May 20, 2026

Establishment of Microbial Eukaryotic Enrichment Cultures from a Chemically Stratified Antarctic Lake and Assessment of Carbon Fixation Potential
14:38

Establishment of Microbial Eukaryotic Enrichment Cultures from a Chemically Stratified Antarctic Lake and Assessment of Carbon Fixation Potential

Published on: April 20, 2012

Unraveling the Unseen Players in the Ocean - A Field Guide to Water Chemistry and Marine Microbiology
10:43

Unraveling the Unseen Players in the Ocean - A Field Guide to Water Chemistry and Marine Microbiology

Published on: November 5, 2014

Streamlined Sampling and Cultivation of the Pelagic Cosmopolitan Larvacean, Oikopleura dioica
11:55

Streamlined Sampling and Cultivation of the Pelagic Cosmopolitan Larvacean, Oikopleura dioica

Published on: June 16, 2020

Area of Science:

  • Marine biology
  • Oceanography
  • Biogeochemistry

Background:

  • Oligotrophic subtropical gyres are critical ocean regions with debated carbon cycling dynamics.
  • In vitro and in situ measurements yield contradictory conclusions regarding net community production (NCP).
  • In vitro observations suggest these regions are net heterotrophic, while in situ data indicate net autotrophy.

Purpose of the Study:

  • To resolve the discrepancy between in vitro and in situ measurements of NCP in subtropical gyres.
  • To identify potential biases in existing methodologies for assessing ocean carbon metabolism.

Main Methods:

  • Evaluation of oxygen-based production estimates for potential biases.
  • Analysis of (13)C enrichment in surface dissolved inorganic carbon (DIC).
  • Assessment of lateral, vertical, and atmospheric organic carbon inputs.
  • Comparison of observed DIC isotopic signatures with predictions from heterotrophic and autotrophic models.

Main Results:

  • In situ oxygen-based estimates are unlikely to produce false-positive net autotrophy.
  • Observed (13)C enrichment of DIC strongly supports net autotrophy (positive NCP).
  • Organic carbon inputs (lateral, vertical, atmospheric) are insufficient to support net heterotrophy.
  • Atmospheric organic matter input is too small and would cause (13)C depletion, contrary to observations.

Conclusions:

  • In vitro measurements implying net heterotrophy are likely biased.
  • The bias stems from an underestimation of photosynthesis and/or an overestimation of respiration in laboratory incubations.
  • Subtropical gyres are likely net autotrophic, consistent with in situ observations and DIC isotopic data.