Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Introduction to Test of Independence01:21

Introduction to Test of Independence

In statistics, the term independence means that one can directly obtain the probability of any event involving both variables by multiplying their individual probabilities. Tests of independence are chi-square tests involving the use of a contingency table of observed (data) values.
The test statistic for a test of independence is similar to that of a goodness-of-fit test:
Hypothesis Test for Test of Independence01:16

Hypothesis Test for Test of Independence

The test of independence is a chi-square-based test used to determine whether two variables or factors are independent or dependent. This hypothesis test is used to examine the independence of the variables. One can construct two qualitative survey questions or experiments based on the variables in a contingency table. The goal is to see if the two variables are unrelated (independent) or related (dependent). The null and alternative hypotheses for this test are:
H0: The two variables (factors)...
Determination of Expected Frequency01:08

Determination of Expected Frequency

Suppose one wants to test independence between the two variables of a contingency table. The values in the table constitute the observed frequencies of the dataset. But how does one determine the expected frequency of the dataset? One of the important assumptions is that the two variables are independent, which means the variables do not influence each other. For independent variables, the statistical probability of any event involving both variables is calculated by multiplying the individual...
Friedman Two-way Analysis of Variance by Ranks01:21

Friedman Two-way Analysis of Variance by Ranks

Friedman's Two-Way Analysis of Variance by Ranks is a nonparametric test designed to identify differences across multiple test attempts when traditional assumptions of normality and equal variances do not apply. Unlike conventional ANOVA, which requires normally distributed data with equal variances, Friedman's test is ideal for ordinal or non-normally distributed data, making it particularly useful for analyzing dependent samples, such as matched subjects over time or repeated measures from...
Expected Frequencies in Goodness-of-Fit Tests01:19

Expected Frequencies in Goodness-of-Fit Tests

A goodness-of-fit test is conducted to determine whether the observed frequency values are statistically similar to the frequencies expected for the dataset. Suppose the expected frequencies for a dataset are equal such as when predicting the frequency of any number appearing when casting a die. In that case, the expected frequency is the ratio of the total number of observations (n) to the number of categories (k).
Protein Networks02:26

Protein Networks

An organism can have thousands of different proteins, and these proteins must cooperate to ensure the health of an organism. Proteins bind to other proteins and form complexes to carry out their functions. Many proteins interact with multiple other proteins creating a complex network of protein interactions.
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Machine learning identifies clinical and sociodemographic factors contributing to post-COVID hospitalization and cardiovascular risk in patients with peripheral artery disease.

Scientific reports·2025
Same author

DGX: Uncovering General Behavior of Deep Graph Models With Model-Level Explanation.

IEEE transactions on computational biology and bioinformatics·2025
Same author

Can machine learning predict late seizures after intracerebral hemorrhages? Evidence from real-world data.

Epilepsy & behavior : E&B·2024
Same author

Abstraction Super-Structuring Normal Forms: Towards a Theory of Structural Induction.

Algorithmic probability and friends : Bayesian prediction and artificial intelligence : Papers from the Ray Solomonoff 85th Memorial Conference, Melbourne, VIC, Australia, November 30-December 2, 2011·2024
Same author

Large datasets from Electronic Health Records predict seizures after ischemic strokes: A Machine Learning approach.

medRxiv : the preprint server for health sciences·2024
Same author

Forecasting User Interests Through Topic Tag Predictions in Online Health Communities.

IEEE journal of biomedical and health informatics·2023
Same journal

A Portfolio Approach to Massively Parallel Bayesian Optimization.

The journal of artificial intelligence research·2025
Same journal

Modeling and Planning with Macro-Actions in Decentralized POMDPs.

The journal of artificial intelligence research·2019
Same journal

Join-Graph Propagation Algorithms.

The journal of artificial intelligence research·2010
Same journal

Online Planning Algorithms for POMDPs.

The journal of artificial intelligence research·2009
See all related articles

Related Experiment Video

Updated: May 20, 2026

Statistical Modelling of Cortical Connectivity Using Non-invasive Electroencephalograms
08:51

Statistical Modelling of Cortical Connectivity Using Non-invasive Electroencephalograms

Published on: November 1, 2019

Efficient Markov Network Structure Discovery Using Independence Tests.

Facundo Bromberg1, Dimitris Margaritis, Vasant Honavar

  • 1Departamento de Sistemas de Informaciόn, Universidad Tecnolόgica Nacional, Mendoza, Argentina.

The Journal of Artificial Intelligence Research
|July 24, 2012
PubMed
Summary
This summary is machine-generated.

Two new algorithms, GSMN* and GSIMN, efficiently learn Markov network structures using statistical independence tests. GSIMN offers significant computational savings over GSMN* while maintaining or improving network quality.

More Related Videos

Modeling the Functional Network for Spatial Navigation in the Human Brain
05:55

Modeling the Functional Network for Spatial Navigation in the Human Brain

Published on: October 13, 2023

Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline
10:44

Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline

Published on: December 7, 2021

Related Experiment Videos

Last Updated: May 20, 2026

Statistical Modelling of Cortical Connectivity Using Non-invasive Electroencephalograms
08:51

Statistical Modelling of Cortical Connectivity Using Non-invasive Electroencephalograms

Published on: November 1, 2019

Modeling the Functional Network for Spatial Navigation in the Human Brain
05:55

Modeling the Functional Network for Spatial Navigation in the Human Brain

Published on: October 13, 2023

Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline
10:44

Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline

Published on: December 7, 2021

Area of Science:

  • Machine Learning
  • Statistical Modeling
  • Artificial Intelligence

Background:

  • Traditional Markov network structure learning methods, like maximum likelihood estimation, are computationally expensive (NP-hard).
  • Existing algorithms often struggle with parameter estimation, hindering efficient structure learning.
  • Statistical independence tests offer a more computationally feasible approach.

Purpose of the Study:

  • To introduce two novel algorithms, GSMN* and GSIMN, for efficient Markov network structure learning.
  • To leverage statistical independence tests to overcome the limitations of maximum likelihood estimation.
  • To enhance efficiency by exploiting conditional independence properties and introducing the Triangle theorem.

Main Methods:

  • Developed GSMN*, an adaptation of the Grow-Shrink algorithm for Bayesian networks.
  • Introduced GSIMN, which extends GSMN* by utilizing Pearl's properties and the novel Triangle theorem to infer additional independences.
  • Employed statistical independence tests as the core mechanism for structure inference.

Main Results:

  • Both GSMN* and GSIMN demonstrate efficient structure learning compared to older methods.
  • GSIMN achieves significant computational savings over GSMN*.
  • GSIMN generates Markov networks of comparable or improved quality, showing near-optimality in inferred independences.

Conclusions:

  • Independence-based algorithms like GSMN* and GSIMN provide an efficient alternative for Markov network structure learning.
  • GSIMN offers a substantial improvement in efficiency by intelligently inferring independences using the Triangle theorem.
  • The proposed methods are effective on both artificial and real-world datasets.