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Updated: May 20, 2026

Detection of Post-Replicative Gaps Accumulation and Repair in Human Cells Using the DNA Fiber Assay
Published on: February 3, 2022
Nek4 regulates entry into replicative senescence and the response to DNA damage in human fibroblasts
Christine L Nguyen1, Richard Possemato, Erica L Bauerlein
1Department of Medical Oncology, Dana-Farber Cancer Institute and Department of Medicine, Harvard Medical School, Boston, MA, USA.
Abstract:
When explanted into culture, normal human cells exhibit a finite number of cell divisions before entering a proliferative arrest termed replicative senescence. To identify genes essential for entry into replicative senescence, we performed an RNA interference (RNAi)-based loss-of-function screen and found that suppression of the Never in Mitosis Gene A (NIMA)-related protein kinase gene NEK4 disrupted timely entry into senescence. NEK4 suppression extended the number of population doublings required to reach replicative senescence in several human fibroblast strains and resulted in decreased transcription of the cyclin-dependent kinase inhibitor p21. NEK4-suppressed cells displayed impaired cell cycle arrest in response to double-stranded DNA damage, and mass spectrometric analysis of Nek4 immune complexes identified a complex containing DNA-dependent protein kinase catalytic subunit [DNA-PK(cs)], Ku70, and Ku80. NEK4 suppression causes defects in the recruitment of DNA-PK(cs) to DNA upon induction of double-stranded DNA damage, resulting in reduced p53 activation and H2AX phosphorylation. Together, these observations implicate Nek4 as a novel regulator of replicative senescence and the response to double-stranded DNA damage.
Insights
NEK4, a protein kinase, is crucial for normal human cells to enter replicative senescence. Suppressing NEK4 delays this process and impairs DNA damage response, indicating its role in cell aging and DNA repair.
Area of Science:
- Cell Biology
- Molecular Biology
- Genetics
Background:
- Normal human cells have a limited number of divisions before entering replicative senescence.
- Identifying genes regulating senescence is key to understanding aging and cancer.
Purpose of the Study:
- To identify genes essential for the entry into replicative senescence.
- To investigate the role of NEK4 in cellular aging and DNA damage response.
Main Methods:
- RNA interference (RNAi)-based loss-of-function screen.
- Cell proliferation assays and senescence analysis.
- Western blotting and mass spectrometry to identify protein complexes.
Main Results:
- Suppression of NEK4 delayed replicative senescence and reduced p21 transcription.
- NEK4-suppressed cells showed impaired cell cycle arrest after DNA damage.
- NEK4 interacts with DNA-PK(cs), Ku70, and Ku80, and its suppression impairs DNA-PK(cs) recruitment to DNA damage sites.
Conclusions:
- NEK4 is a novel regulator of replicative senescence.
- NEK4 plays a role in the DNA double-strand break repair pathway.
- NEK4 is important for timely cell cycle arrest and DNA damage response.
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