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Published on: January 28, 2019
A unique human rotavirus (non vaccine) G9P4 genotype infection in a child with gastroenteritis
V Mangayarkarasi1, A Prema, P Gunasekaran
1Department of Pediatrics, SRM MCH and RC, Chennai, Tamil Nadu, India. mangaikumaran@yahoo.com
Insights
This study identified common Rotavirus genotypes in young children with gastroenteritis. The findings highlight the prevalence of G9P8 and G1P8, alongside non-vaccine genotypes like G9P4.
Area of Science:
- Virology
- Pediatric infectious diseases
- Molecular epidemiology
Background:
- Group A Rotaviruses (RV) are a leading cause of severe gastroenteritis in children under five worldwide.
- Commonly important serotypes include G1-G4 and G9.
- Understanding circulating RV genotypes is crucial for public health and vaccine strategies.
Observation:
- 300 children under five with acute gastroenteritis were screened for RV.
- Enzyme-linked immunosorbent assay (ELISA) detected RV group-specific VP6 antigen in 47 samples.
- Reverse transcriptase polymerase chain reaction (RT-PCR) was used for genotyping 20 positive samples.
Findings:
- The study identified several Rotavirus genotypes including G9P8, G1P8, G2P4, and G1P6.
- The non-vaccine genotype G9P4 was also detected.
- Five samples were identified as G1, with P types undetermined.
Implications:
- The identified genotypes, including G9P4, provide valuable data for vaccine efficacy monitoring.
- This molecular epidemiology study informs surveillance of Rotavirus strains in pediatric populations.
- Genotyping data supports targeted public health interventions against Rotavirus gastroenteritis.
Abstract:
Group A Rotaviruses with serotypes G1-G4 and G9 are the common Rotavirus types of clinical importance. This study aimed at determining the different Rotavirus genotypes in stool sample of children below 5 years. A total of 300 children with acute gastroenteritis were tested for group specific VP6 antigen of group A Rotaviruses by Enzyme Linked Immunosorbent Assay. 47 of these samples were positive for Rotavirus antigen. Out of these, 20 positive samples were subjected to Reverse Transcriptase Polymerase Chain Reaction for genotyping. The identified genotypes were G9P8, G1P8, G2P4, G9P4 (non-vaccine genotype), G1P6, and G1 (P types not identified in 5 samples).
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