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Updated: May 19, 2026

Quantitative Polymerase Chain Reaction-based Analyses of Murine Intestinal Microbiota After Oral Antibiotic Treatment
Published on: November 17, 2018
[Proton-pump inhibitor therapy and small bowel bacterial contamination]
1Bajcsy-Zsilinszky Kórház I. Belgyógyászat-Gasztroenterológia Budapest Maglódi út 89-91. 1106. hamvas.jozsef@bajcsy.hu
Long-term proton pump inhibitor use is linked to small intestinal bacterial overgrowth in 21% of patients. Probiotics can manage mild cases, while antibiotics like Rifaximin are effective for chronic conditions.
Area of Science:
- Gastroenterology
- Microbiology
Background:
- Proton pump inhibitors (PPIs) are widely used for acid suppression.
- Long-term PPI use has been increasingly associated with gastrointestinal symptoms and small intestinal bacterial overgrowth (SIBO).
- Understanding the impact of PPIs on the gut microbiome is crucial.
Purpose of the Study:
- To investigate the prevalence of SIBO in patients on long-term proton pump inhibitor therapy.
- To evaluate treatment strategies for PPI-associated SIBO.
Main Methods:
- Utilized hydrogen breath tests (HBT) for diagnosing SIBO.
- Conducted investigations across two medical centers.
- Analyzed data from patients undergoing long-term PPI treatment.
Main Results:
- A positive hydrogen breath test (indicating SIBO) was observed in 21% of patients on long-term PPIs.
- Probiotics were effective in achieving symptom-free conditions for uncomplicated cases.
- Rifaximin demonstrated high efficacy and fewer side effects for chronic SIBO compared to systemic antibiotics.
Conclusions:
- Long-term proton pump inhibitor therapy is associated with a significant prevalence of small intestinal bacterial overgrowth.
- Treatment approaches should be tailored, with probiotics for mild cases and antibiotics, particularly Rifaximin, for chronic SIBO.
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