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Updated: May 19, 2026

Large Scale Non-targeted Metabolomic Profiling of Serum by Ultra Performance Liquid Chromatography-Mass Spectrometry (UPLC-MS)
Published on: March 14, 2013
Full utilization of a mass spectrometer using on-demand sharing with multiple LC units
Shu Li1, Qin Hao, John Gounarides
1Analytical Sciences, Novartis Institutes for BioMedical Research, 250 Massachusetts Avenue, Cambridge, MA 02139, USA. Shu-1.Li@novartis.com
This study introduces a novel liquid chromatography-mass spectrometry (LC/MS) system that maximizes throughput by flexibly recruiting multiple LC units. This approach significantly reduces sample analysis time for large-scale biochemical assays and drug discovery.
Area of Science:
- Analytical Chemistry
- Biochemistry
- Mass Spectrometry
Background:
- Liquid chromatography-mass spectrometry (LC/MS) throughput is often limited.
- Existing systems sharing a mass spectrometer (MS) do not fully utilize the MS duty cycle for maximum throughput.
Purpose of the Study:
- To develop and demonstrate an LC/MS system capable of flexibly recruiting a variable number of LC units to fully utilize the MS duty cycle.
- To enable high-throughput analysis for applications like large-volume biochemical assays and drug discovery.
Main Methods:
- Construction of a modular MS system designed to recruit any number of LC units based on application demands.
- Development of a method to port existing LC/MS methods to the new system for optimized MS utilization.
- Demonstration using a prototypical system with eight LC units and 1-minute chromatographic separations.
Main Results:
- A prototypical eight-unit LC/MS system was constructed and validated.
- Achieved an average LC/MS analysis time of 10.5 seconds per sample for 384-well plate format with 1-minute separations.
- Successfully applied the system to large-volume biochemical assays and analysis of diverse molecular entities in drug discovery.
Conclusions:
- The developed flexible LC/MS system significantly enhances throughput by optimizing MS duty cycle utilization.
- This plug-and-play system allows for application-specific recruitment of LC units, offering a scalable solution for high-throughput analysis.
- The system demonstrates potential for accelerating drug discovery efforts through efficient large-scale biochemical assay analysis.
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