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Updated: May 19, 2026

Single-Molecule Real-Time Visualization of DNA Unwinding by CMG Helicase
Published on: September 27, 2024
Visualization of the MCM DNA helicase at replication factories before the onset of DNA synthesis
Tomás Aparicio1, Diego Megías, Juan Méndez
1DNA Replication Group, Molecular Oncology Programme, Spanish National Cancer Research Centre (CNIO), Melchor Fernández Almagro, 3, 28029, Madrid, Spain.
Abstract:
In mammalian cells, DNA synthesis takes place at defined nuclear structures termed "replication foci" (RF) that follow the same order of activation in each cell cycle. Intriguingly, immunofluorescence studies have failed to visualize the DNA helicase minichromosome maintenance (MCM) at RF, raising doubts about its physical presence at the sites of DNA synthesis. We have revisited this paradox by pulse-labeling RF during the S phase and analyzing the localization of MCM at labeled DNA in the following cell cycle. Using high-throughput confocal microscopy, we provide direct evidence that MCM proteins concentrate in G1 at the chromosome structures bound to become RF in the S phase. Upon initiation of DNA synthesis, an active "MCM eviction" mechanism contributes to reduce the excess of DNA helicases at RF. Most MCM complexes are released from chromatin, except for a small but detectable fraction that remains at the forks during the S phase, as expected for a replicative helicase.
Insights
Mammalian cells utilize replication foci (RF) for DNA synthesis. This study reveals minichromosome maintenance (MCM) proteins concentrate at future RF sites in G1, with excess MCM being evicted upon DNA synthesis initiation.
Area of Science:
- Molecular Biology
- Cell Biology
- Genetics
Background:
- DNA synthesis occurs at replication foci (RF) in mammalian cells.
- Previous studies questioned the presence of minichromosome maintenance (MCM) proteins at RF.
- This paradox suggested MCM might not be physically present at DNA synthesis sites.
Purpose of the Study:
- To investigate the localization of MCM proteins during DNA replication.
- To resolve the apparent discrepancy between MCM presence and RF visualization.
- To elucidate the role of MCM in the context of replication foci.
Main Methods:
- Pulse-labeling of replication foci (RF) during S phase.
- Analysis of MCM protein localization at labeled DNA in the subsequent cell cycle.
- High-throughput confocal microscopy for detailed visualization.
Main Results:
- MCM proteins were found to concentrate in G1 at chromosomal sites destined to become RF in S phase.
- An active MCM eviction mechanism was identified, reducing MCM levels at RF upon DNA synthesis initiation.
- A small, detectable fraction of MCM remained at replication forks during S phase, consistent with its helicase function.
Conclusions:
- MCM proteins are recruited to future replication sites in G1.
- An eviction process regulates MCM levels at active replication foci.
- This study provides direct evidence for MCM's physical presence and dynamic regulation at sites of DNA synthesis.
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