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Published on: September 28, 2017
Effect of circadian clock mutations on DNA damage response in mammalian cells
Shobhan Gaddameedhi1, Joyce T Reardon, Rui Ye
1Department of Biochemistry and Biophysics, University of North Carolina School of Medicine, Chapel Hill, NC, USA.
Abstract:
The circadian clock is a global regulatory mechanism that confers daily rhythmicity on many biochemical and physiological functions, including DNA excision repair in mammalian organisms. Here, we investigated the effect of the circadian clock on the major DNA damage response pathways by using mouse cell lines mutated in genes encoding proteins in the positive (Bmal1, CLOCK) or negative (Cry 1/2, Per 1/2) arms of the transcription-translation feedback loop that generates the circadian clock. We find that cells mutated in these genes are indistinguishable from wild-type in their response to UV, ionizing radiation and mitomycin C. We conclude that either the majority of DNA damage response reactions are not controlled by the circadian clock or that, even if such a control exists at the organism level, it is supplanted by homeostatic control mechanisms at the cellular level in tissue culture. We suggest that caution must be exercised in extrapolating from experiments in tissue culture to whole animals with respect to the effect of the circadian clock on cellular response to DNA damaging agents.
Insights
The circadian clock does not appear to regulate DNA repair pathways in mouse cells. Cellular mechanisms may override any organism-level clock control of DNA damage responses.
Area of Science:
- Molecular Biology
- Chronobiology
- Genetics
Background:
- The circadian clock regulates daily rhythms in mammalian physiology and biochemical functions.
- DNA repair mechanisms are crucial for maintaining genomic integrity.
- The interplay between circadian rhythms and DNA damage response (DDR) is not fully understood.
Purpose of the Study:
- To investigate the influence of the circadian clock on major DNA damage response pathways.
- To determine if mutations in core circadian clock genes affect cellular responses to DNA damaging agents.
Main Methods:
- Utilized mouse cell lines with mutations in key circadian clock genes (Bmal1, CLOCK, Cry 1/2, Per 1/2).
- Assessed cellular responses to various DNA damaging agents, including UV radiation, ionizing radiation, and mitomycin C.
- Compared the DNA damage response of mutant cell lines to wild-type cells.
Main Results:
- Mutant cell lines lacking functional circadian clock components showed no significant difference in their response to UV, ionizing radiation, or mitomycin C compared to wild-type cells.
- The DNA damage response pathways investigated were not observably affected by the absence of a functional circadian clock in these cellular models.
Conclusions:
- The circadian clock may not directly control most DNA damage response reactions at the cellular level in vitro.
- Homeostatic control mechanisms within cells might supersede circadian clock influence on DNA repair in tissue culture.
- Extrapolation of circadian clock effects on DNA damage response from cell culture to whole organisms requires caution.
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Nucleotide Excision Repair
Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...
