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In Silico Modeling Method for Computational Aquatic Toxicology of Endocrine Disruptors: A Software-Based Approach Using QSAR Toolbox
Published on: August 28, 2019
QSAR of acute toxicity of halogenated phenol to green fluorescent protein by using density functional theory
1College of Biological, Chemical Sciences and Engineering, Jiaxing University, 118 Jiahang Road, Jiaxing 314001, Zhejiang, People's Republic of China.
Abstract:
A novel approach was established to predict toxicity of environmental pollutants by using green fluorescent protein (GFP) as bio-marker. In the approach, recombinant Escherichia coli was constructed to express GFP. The toxicity values (-lgEC (50)) of 14 halogenated phenols to recombinant E. coli with GFP gene were measured. And optimized calculation was carried out at B3LYP/6-31G* level using density functional theory method. Based on the MTLSER model, the obtained parameters were taken as theoretical descriptors to establish the novel QSAR model for predicting -lgEC (50) (R (2) = 0.922). The model includes two variables (standard entropy (S (θ)) and the most negative atomic net charges of the molecule (q (-))). The results of cross-validation test (q (2) = 0.868) indicate the model of this study has optimum stability, which shows that it is feasible to predict to toxicity of chemistry utilizing recombinant E. coli with GFP gene.
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