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Small-molecule inhibition of MLL activity by disruption of its interaction with WDR5
Guillermo Senisterra1, Hong Wu, Abdellah Allali-Hassani
1Structural Genomics Consortium, 101 College Street, Toronto, Ontario, Canada.
Abstract:
WDR5 (WD40 repeat protein 5) is an essential component of the human trithorax-like family of SET1 [Su(var)3-9 enhancer-of-zeste trithorax 1] methyltransferase complexes that carry out trimethylation of histone 3 Lys4 (H3K4me3), play key roles in development and are abnormally expressed in many cancers. In the present study, we show that the interaction between WDR5 and peptides from the catalytic domain of MLL (mixed-lineage leukaemia protein) (KMT2) can be antagonized with a small molecule. Structural and biophysical analysis show that this antagonist binds in the WDR5 peptide-binding pocket with a Kd of 450 nM and inhibits the catalytic activity of the MLL core complex in vitro. The degree of inhibition was enhanced at lower protein concentrations consistent with a role for WDR5 in directly stabilizing the MLL multiprotein complex. Our data demonstrate inhibition of an important protein-protein interaction and form the basis for further development of inhibitors of WDR5-dependent enzymes implicated in MLL-rearranged leukaemias or other cancers.
Insights
Researchers developed a small molecule to block the interaction between WD40 repeat protein 5 (WDR5) and mixed-lineage leukemia protein (MLL). This WDR5-MLL inhibitor shows potential for treating cancers like MLL-rearranged leukemias.
Area of Science:
- Biochemistry
- Molecular Biology
- Oncology
Background:
- WD40 repeat protein 5 (WDR5) is a key component of SET1/mixed-lineage leukemia (MLL) complexes.
- These complexes are crucial for histone 3 Lys4 trimethylation (H3K4me3), impacting development and cancer.
- Aberrant WDR5 expression is linked to various malignancies.
Purpose of the Study:
- To investigate the potential of small molecules to antagonize the WDR5-MLL interaction.
- To characterize the binding and inhibitory mechanism of a novel small molecule antagonist.
- To explore therapeutic strategies for WDR5-dependent cancers.
Main Methods:
- Small molecule screening and synthesis.
- Structural and biophysical analyses (e.g., binding affinity determination).
- In vitro enzymatic assays to assess MLL core complex activity.
Main Results:
- A small molecule antagonist was identified that binds to the WDR5 peptide-binding pocket with a Kd of 450 nM.
- The antagonist inhibits the catalytic activity of the MLL core complex in vitro.
- Inhibition efficacy was concentration-dependent, suggesting WDR5 stabilizes the MLL complex.
Conclusions:
- The study demonstrates successful inhibition of a critical protein-protein interaction involving WDR5 and MLL.
- This provides a foundation for developing targeted therapies against WDR5-dependent enzymes.
- Potential applications include treatment of MLL-rearranged leukemias and other cancers.
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