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Updated: May 18, 2026

T4 Bacteriophage and E. coli Interaction in the Murine Intestine: A Prototypical Model for Studying Host-Bacteriophage Dynamics In Vivo
Published on: January 26, 2024
Virulent bacteriophages can target O104:H4 enteroaggregative Escherichia coli in the mouse intestine
Damien Maura1, Matthieu Galtier, Chantal Le Bouguénec
1Department of Microbiology, Institut Pasteur, Molecular Biology of the Gene in Extremophiles Unit, Paris, France.
Abstract:
In vivo bacteriophage targeting of enteroaggregative Escherichia coli (EAEC) was assessed using a mouse intestinal model of colonization with the O104:H4 55989Str strain and a cocktail of three virulent bacteriophages. The colonization model was shown to mimic asymptomatic intestinal carriage found in humans. The addition of the cocktail to drinking water for 24 h strongly decreased ileal and weakly decreased fecal 55989Str concentrations in a dose-dependent manner. These decreases in ileal and fecal bacterial concentrations were only transient, since 55989Str concentrations returned to their original levels 3 days later. These transient decreases were independent of the mouse microbiota, as similar results were obtained with axenic mice. We studied the infectivity of each bacteriophage in the ileal and fecal environments and found that 55989Str bacteria in the mouse ileum were permissive to all three bacteriophages, whereas those in the feces were permissive to only one bacteriophage. Our results provide the first demonstration that bacterial permissivity to infection with virulent bacteriophages is not uniform throughout the gut; this highlights the need for a detailed characterization of the interactions between bacteria and bacteriophages in vivo for the further development of phage therapy targeting intestinal pathogens found in the gut of asymptomatic human carriers.
Insights
Bacteriophage therapy targeting enteroaggregative Escherichia coli (EAEC) showed transient reductions in mouse models. Bacterial permissivity to phages varied between gut locations, impacting treatment effectiveness.
Area of Science:
- Microbiology
- Gastroenterology
- Infectious Diseases
Background:
- Enteroaggregative Escherichia coli (EAEC) is an intestinal pathogen.
- Bacteriophage therapy is a promising alternative to antibiotics for bacterial infections.
- Understanding phage-host interactions in vivo is crucial for therapeutic development.
Purpose of the Study:
- To assess in vivo bacteriophage targeting of EAEC O104:H4 55989Str using a mouse intestinal colonization model.
- To investigate the dose-dependent efficacy and duration of phage therapy.
- To determine the influence of gut location on bacterial permissivity to bacteriophages.
Main Methods:
- A mouse intestinal colonization model was established with EAEC O104:H4 55989Str.
- A cocktail of three virulent bacteriophages was administered via drinking water.
- Bacterial concentrations in ileal and fecal samples were quantified.
- Experiments were conducted in both conventional and axenic mice to assess microbiota independence.
- Bacteriophage infectivity and bacterial permissivity were evaluated in different gut segments.
Main Results:
- Phage cocktail administration significantly reduced ileal and weakly reduced fecal EAEC concentrations in a dose-dependent manner.
- These reductions were transient, with bacterial levels returning to baseline within 3 days.
- The observed decreases were independent of the host's microbiota.
- Bacterial permissivity to phage infection differed significantly between the ileum (permissive to all three phages) and feces (permissive to only one).
Conclusions:
- Bacterial permissivity to bacteriophage infection is not uniform throughout the gastrointestinal tract.
- This heterogeneity in phage infectivity poses challenges for developing effective phage therapy targeting intestinal pathogens.
- Further characterization of in vivo host-phage interactions is necessary for optimizing phage therapy strategies.
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