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Updated: May 18, 2026

Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline
Published on: December 7, 2021
Isospectral compression and other useful isospectral transformations of dynamical networks
1ABC Math Program and School of Mathematics, Georgia Institute of Technology, 686 Cherry Street, Atlanta, Georgia 30332, USA. bunimovih@math.gatech.edu
Abstract:
It is common knowledge that a key dynamical characteristic of a network is its spectrum (the collection of all eigenvalues of the network's weighted adjacency matrix). We demonstrated that it is possible to reduce a network, considered as a graph, to a smaller network with fewer vertices and edges while preserving the spectrum (or spectral information) of the original network [L. A. Bunimovich and B. Z. Webb, Nonlinearity 25, 211-254 (2012)]. This procedure allows for the introduction of new equivalence relations between networks, where two networks are spectrally equivalent if they can be reduced to the same network. Additionally, using this theory it is possible to establish whether a network, modeled as a dynamical system, has a globally attracting fixed point (is strongly synchronizing). In this paper, we further develop this theory of isospectral network transformations and demonstrate that our procedures are applicable to families of parameterized networks and networks of arbitrary size.
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