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Updated: May 17, 2026

Next-generation Sequencing of 16S Ribosomal RNA Gene Amplicons
Published on: August 29, 2014
A new vector for identification of prokaryotes and their variable-size genomes
Tao Hou1, Fu Liu, Caixia X Lin
1College of Communications Engineering, Jilin University, Changchun, China. ht_happy@126.com
Abstract:
A large number of prokaryotes have been produced, so how to provide a means to describe and distinguish them accurately is becoming a key issue of prokaryotic taxonomy. We proposed an efficient algorithm to filter out most genome fragments that are horizontally transferred, and extracted a new genome vector (GV). To highlight the power of GV, we applied it to identify prokaryotes and their variable-size genome fragments. The result indicated that the new vector as species tags can accurately identify genome fragments as short as 3,000 bp at species level.
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