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Published on: January 28, 2019
Prevalence of group A genotype human rotavirus among children with dirarrhea in Thailand, 2009-2011
Ornwalan Maiklang1, Viboonsak Vutithanachot, Chanpim Vutithanachot
1Center of Excellence in Clinical Virology, Department of Pediatrics, Faculty of Medicine, Chulalongkorn University, Bangkok, Thailand.
Insights
Group A rotavirus, a common cause of severe diarrhea in children, was investigated in Thailand. The prevalent G3P[8] genotype was identified, informing future vaccine development for rotavirus gastroenteritis.
Area of Science:
- Virology
- Pediatrics
- Infectious Diseases
Background:
- Rotavirus is a leading cause of severe infantile diarrhea globally, particularly in developing nations.
- Understanding rotavirus epidemiology is crucial for effective public health interventions and vaccine strategies.
Purpose of the Study:
- To determine the prevalence and seasonal distribution of group A rotavirus infections in Thai children.
- To identify circulating rotavirus genotypes for vaccine development.
Main Methods:
- Retrospective analysis of stool samples from children with acute gastroenteritis or diarrhea.
- Detection of group A rotaviruses using reverse transcription-polymerase chain reaction (RT-PCR).
- Genotyping based on VP7 and VP4 genes, with phylogenetic analysis and GenBank comparison.
Main Results:
- Group A rotaviruses were detected in 44.5% of 562 specimens.
- The most common genotype identified was G3P[8] (60.4%), followed by G1P[8] (39.2%).
- A low prevalence of G2P[4] (0.4%) was also observed.
Conclusions:
- Group A rotavirus is a significant pathogen in Thai children presenting with gastroenteritis.
- The predominance of the G3P[8] genotype in this cohort provides essential data for rotavirus vaccine strain selection in the region.
Abstract:
Rotavirus is the most common cause of severe diarrhea in infants and young children world-wide, with the highest fatality rate in developing countries. We investigated the presence and seasonal distribution of group A rotavirus infection among Thai children. The data will be used for vaccine development. Samples were collected from infants and children with acute gastroenteritis or diarrhea admitted to two hospitals between June 2009 and May 2011. Group A rotaviruses were detected in 250 (44.5%) of 562 specimens by RT-PCR. The most prevalent genotype was G3P[8] (60.4%) followed by G1P[8] (39.2%) and G2P[4] (0.4%). The specimens were subjected to phylogenetic analysis based on the VP7 and VP4 genes. We examined the rotavirus genotypes and compared them with data from the GenBank database.
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