Pharmacophore-based drug design and biological evaluation of novel ABCB1 inhibitors

Sheng-lie Zhang1, Yin-xiang Wei, Qian Li

  • 1School of Pharmacy, China Pharmaceutical University, Nanjing 210009, China.

Insights

Overexpression of the ABCB1 transporter causes multidrug resistance in cancer chemotherapy. This study developed a pharmacophore model to identify novel ABCB1 inhibitors, leading to the discovery of potential lead compounds YZ-3 and YZ-16.

Area of Science:

  • Medicinal Chemistry
  • Pharmacology
  • Drug Discovery

Background:

  • Overexpression of ABCB1 (P-glycoprotein) is a significant obstacle in cancer chemotherapy, contributing to multidrug resistance and limiting oral drug bioavailability.
  • Inhibiting ABCB1 activity is a key strategy to overcome chemoresistance and improve the efficacy of cancer treatments.

Purpose of the Study:

  • To develop a 3D pharmacophore model for ABCB1 inhibitors.
  • To identify novel potent ABCB1 inhibitors through database screening.
  • To validate the inhibitory activity of identified compounds using biological assays.

Main Methods:

  • Construction and validation of a 3D pharmacophore model based on known ABCB1 inhibitors.
  • Virtual screening of an in-house 3D database using the developed pharmacophore model.
  • In vitro evaluation of identified hit compounds using rhodamine 123 accumulation, chemosensitization, and cell permeability assays.

Main Results:

  • A validated 3D pharmacophore model was generated, comprising three hydrophobic features and one hydrogen bond acceptor.
  • Virtual screening identified several potential ABCB1 inhibitors from the in-house database.
  • Compounds YZ-3 and YZ-16 demonstrated significant inhibitory activity in biological assays, showing potential as lead compounds.

Conclusions:

  • The developed 3D pharmacophore model is effective for identifying novel ABCB1 inhibitors.
  • Compounds YZ-3 and YZ-16 represent promising lead candidates for the development of new drugs to combat multidrug resistance in cancer therapy.

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